| RRC ID |
84510
|
| 著者 |
Yin J, He M, Liu XX, Ren CB, Liu HH, Luo H, Chen G, Wang ZF, Debnath SC, Wang PM, Chen HX, Zheng DQ.
|
| タイトル |
Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains.
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| ジャーナル |
Antonie Van Leeuwenhoek
|
| Abstract |
A Gram-stain-negative, light khaki, strictly aerobic, rod-shaped, motile via multiple flagella, and catalase- and oxidase-positive bacterium, designated as SSM4.3T, was isolated from the seaweed of Gouqi Island in the East China Sea. The novel isolate grows at 0-5.0% NaCl concentrations (w/v) (optimum 1%), pH 5.0-9.0 (optimum pH 7.0), and 15-37 °C (optimum 30 °C). The 16S rRNA gene sequences-based phylogeny indicates that the novel marine isolate belongs to the family Rhizobiaceae and that it shared the greatest sequence similarity (98.9%) with Peteryoungia rhizophila CGMCC 1.15691T. This classification was also supported by phylogenetic analysis using core genes. The predominant fatty acids (≥ 10%) of the strain were identified as C18:1 ω7c/C18:1 ω6c. Q-10 was identified as the major isoprenoid quinone, with trace levels of Q-9 present. The major polar lipids were identified as diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylglycerol. The complete genome size of strain SSM4.3T is 4.39 Mb with a DNA G+C content of 61.3%. The average nucleotide identity, digital DNA-DNA hybridization, and average amino acid identity values between the genomes of strain SSM4.3T and its closely related representatives were 74.80-86.93%, 20.00-32.30%, and 70.30-91.52%, respectively. Phylogenetic analysis, grounded on the core genes, reveals the evolutionary relationship between SSM4.3T and other Peteryoungia strains. Pan-genomics analysis of 8 previously classified Peteryoungia species and SSM4.3T revealed their unique genetic features and functions. Overall, strain SSM4.3T was considered to be a new species of the Peteryoungia genus; the name Peteryoungia algae sp. nov. has been proposed, with type strain SSM4.3T (= LMG 32561 = MCCC 1K07170).
|
| 巻・号 |
117(1)
|
| ページ |
112
|
| 公開日 |
2024-8-12
|
| DOI |
10.1007/s10482-024-02010-7
|
| PII |
10.1007/s10482-024-02010-7
|
| PMID |
39133351
|
| MeSH |
Bacterial Typing Techniques
Base Composition*
China
DNA, Bacterial* / genetics
Fatty Acids* / analysis
Fatty Acids* / chemistry
Genome, Bacterial
Islands
Nucleic Acid Hybridization
Phylogeny*
RNA, Ribosomal, 16S* / genetics
Seaweed* / microbiology
Sequence Analysis, DNA
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| リソース情報 |
| 一般微生物 |
JCM21505 |
