| RRC ID |
84681
|
| 著者 |
Bai L, Paek J, Shin Y, Kim H, Kim SH, Shin JH, Kook JK, Chang YH.
|
| タイトル |
Aerococcus kribbianus sp. nov., a facultatively anaerobic bacterium isolated from pig faeces.
|
| ジャーナル |
Int J Syst Evol Microbiol
|
| Abstract |
Two cocci-shaped, facultatively anaerobic, Gram-positive bacteria isolated from the faeces of a pig were designated as strains YH-aer221T and YH-aer222. Analysis of the 16S rRNA gene sequences revealed that the isolates were most closely related to Aerococcus suis JCM 18035T with 96.6 % similarity. The multi-locus sequence tree revealed that the isolates formed a sub-cluster adjacent to A. suis JCM 18035T. The average nucleotide identity values for the isolates and their most closely related strains were 71.8 and 71.7 %, respectively; and the digital DNA-DNA hybridization values for the isolates and their most closely related strains were 25.6 and 25.5 %, respectively. The main fatty acids were C18 : 1ω9c, C16 : 0 and C18 : 0. The cell wall contained the meso-diaminopimelic acid-based peptidoglycan. The two isolates shared the same metabolic pathways. Isolates YH-aer221T and YH-aer222 harboured the same CRISPR array with 33 and 46 spacers, respectively. Single-genome vs. metagenome analysis showed that the genomes of the isolates were not found in the available metagenome database. Given their chemotaxonomic, phenotypic and phylogenetic properties, YH-aer221T (= KCTC 25571T=JCM 35699T) and YH-aer222 (=KCTC 25573=JCM 35700) represent a novel taxon. The name Aerococcus kribbianus sp. nov. is proposed.
|
| 巻・号 |
74(2)
|
| 公開日 |
2024-2-1
|
| DOI |
10.1099/ijsem.0.006284
|
| PMID |
38415779
|
| MeSH |
Aerococcus*
Anaerobiosis
Animals
Bacteria, Anaerobic
Bacterial Typing Techniques
Base Composition
DNA, Bacterial / genetics
Fatty Acids / chemistry
Feces
Phylogeny
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Swine
|
| リソース情報 |
| 一般微生物 |
JCM35699
JCM35700
JCM18035
JCM20461 |
