RRC ID 85071
著者 Lee HE, Park SJ, Huh JW, Imai H, Kim HS.
タイトル The enhancer activity of long interspersed nuclear element derived microRNA 625 induced by NF-κB.
ジャーナル Sci Rep
Abstract Transposable elements (TEs) are DNA sequences that cut or introduced into the genome, and they represent a massive portion of the human genome. TEs generate a considerable number of microRNAs (miRNAs) are derived from TEs (MDTEs). Numerous miRNAs are related to cancer, and hsa-miRNA-625 is a well-known oncomiR derived from long interspersed nuclear elements (LINEs). The relative expression of hsa-miRNA-625-5p differs in humans, chimpanzees, crab-eating monkeys, and mice, and four primers were designed against the 3'UTR of GATAD2B to analyze the different quantities of canonical binding sites and the location of miRNA binding sites. Luciferase assay was performed to score for the interaction between hsa-miRNA-625 and the 3'UTR of GATAD2B, while blocking NF-κB. In summary, the different numbers of canonical binding sites and the locations of miRNA binding sites affect gene expression, and NF-κB induces the enhancer activity of hsa-miRNA-625-5p by sharing the binding sites.
巻・号 11(1)
ページ 3139
公開日 2021-2-4
DOI 10.1038/s41598-021-82735-x
PII 10.1038/s41598-021-82735-x
PMID 33542430
PMC PMC7862687
MeSH 3' Untranslated Regions A549 Cells Animals Base Pairing Computational Biology / methods DNA Primers / chemical synthesis DNA Primers / metabolism DNA Transposable Elements* Enhancer Elements, Genetic* Genes, Reporter Genome* Humans Long Interspersed Nucleotide Elements* Luciferases / genetics Luciferases / metabolism Macaca fascicularis Mice MicroRNAs / genetics* MicroRNAs / metabolism NF-kappa B / genetics* NF-kappa B / metabolism Pan troglodytes Repressor Proteins / genetics* Repressor Proteins / metabolism
IF 3.998
リソース情報
GAIN human western chimpanzee crab-eating monkey