RRC ID 87044
Author Mo Y, Ishiguro K, Miyauchi K, Sakaguchi Y, Hanzawa Y, Akiyama N, Murayama A, Machida K, Imataka H, Yamashita A, Ohira T, Shirouzu M, Suzuki T.
Title Translational regulation by oxidative desulfuration of tRNA modifications.
Journal Nat Commun
Abstract Modifications in the anticodon region of transfer RNA (tRNA) are essential for accurate and efficient protein synthesis. 5-Methyl-2-thiouridine derivatives (xm5s2U) are major modifications at the wobble position of tRNA anticodons decoding purine-ending two-codon sets. Although the thiocarbonyl group of xm5s2U enhances decoding efficiency, it is chemically susceptible to oxidative desulfuration, yielding 4-pyrimidinone derivatives (xm5h2U). Here, we identify xm5h2U derivatives in human cells and mouse tissues and confirm their cellular formation by spike-in experiments. Desulfurized tRNAs carrying 5-methoxycarbonylmethyl-4-pyrimidinone (mcm5h2U) show impaired codon recognition in a human reconstituted in vitro translation system. The mcm5h2U modification reduces aminoacylation of tRNAs for lysine, glutamate, and glutamine, but not arginine. Cryogenic electron microscopy reveals the structural basis of altered AAA/AAG decoding by mcm5h2U at the ribosomal A-site. These findings reveal a mechanism by which oxidative desulfuration of tRNA modifications dynamically regulates codon recognition and protein synthesis under oxidative stress conditions in human and mammalian cells.
Volume 17(1)
Published 2026-3-10
DOI 10.1038/s41467-026-70126-7
PII 10.1038/s41467-026-70126-7
PMID 41807381
PMC PMC12976133
MeSH Animals Anticodon / genetics Anticodon / metabolism Codon / genetics Codon / metabolism HEK293 Cells Humans Mice Oxidation-Reduction Oxidative Stress Protein Biosynthesis* RNA, Transfer* / chemistry RNA, Transfer* / genetics RNA, Transfer* / metabolism Ribosomes / metabolism Thiouridine / analogs & derivatives Thiouridine / chemistry Thiouridine / metabolism
IF 12.121
Resource
Human and Animal Cells MKN45(RCB1001) HeLa(RCB0007) 293T(RCB2202) HuH-7(RCB1366)