Reference - Detail
| RRC ID | 88855 |
|---|---|
| Author | Pavloudi C, Shlafstein MD, De La Flor YT, Smith EM, Peñuela AC, Papke E, Oliver L, Slattery K, Lissner G, Coelho LC, Oline DK, Videau P, Strangman WK, Ushijima B, Saw JH. |
| Title | Janthinobacterium aestuarii sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA. |
| Journal | Int J Syst Evol Microbiol |
| Abstract |
Strain TB1-E2-13T was isolated from water collected from the Tidal Basin in Washington, D.C., USA, due to the bright purple colour of its colonies, and was taxonomically evaluated with a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain TB1-E2-13T was most similar to species in the Janthinobacterium genus. For more precise taxonomic inference, a phylogenomic analysis was conducted and indicated that strain TB1-E2-13T was most closely related to Janthinobacterium lividum, 'Janthinobacterium kumbetense', Janthinobacterium rivuli and Janthinobacterium violaceinigrum. Analyses of genomic indices found that pairwise comparisons between strain TB1-E2-13T and other members of the Janthinobacterium genus returned values below the threshold of species novelty. Based on a polyphasic characterization and identifying differences in genomic and taxonomic data, strain TB1-E2-13T represents a novel species, for which the name Janthinobacterium aestuarii sp. nov. is proposed. The type strain is TB1-E2-13T (=ATCC TSD-339T=JCM 36076T). |
| Volume | 75(5) |
| Published | 2025-5-1 |
| DOI | 10.1099/ijsem.0.006768 |
| PMID | 40313181 |
| PMC | PMC12048719 |
| MeSH | Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics District of Columbia Fatty Acids / analysis Genome, Bacterial Indoles* / metabolism Oxalobacteraceae* / classification Oxalobacteraceae* / genetics Oxalobacteraceae* / isolation & purification Oxalobacteraceae* / metabolism Phylogeny* RNA, Ribosomal, 16S / genetics Seawater* / microbiology Sequence Analysis, DNA |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Bluesky |
| Total number of mentions | 3 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM36076 |