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Species Resource Title
Algae NIES-4330 Recent plastid replacement in Karlodinium ballantinum (Kareniaceae, Dinoflagellata) challenges the paradigms of endosymbiotic gene transfer.
C.intestinalis / (O.japonicus) Wild C. int Unique Tunicate Traits Possibly Encoded by Horizontally Transferred Genes.
GBIF Vascular plants database of Atsugi City Museum , Herbarium, University Archives and Collections, Fukushima University, Japan (FKSE) , Gymnospermatatophytina Collection of Saitama Museum of Natural History , Insect Collection of Yokosuka City Museum , Vascular plant specimens of Iida City Museum , Plant specimens of Oiso Municipal Museum , Herbarium of Hokkaido University Museum (SAPS) , Spermatophyte collection of Himeji City Science Museum , Fish collection of the Kagoshima University Museum , Vascular Plant Collection of Natural History Museum and Institute, Chiba , ... Phylogenomics reveals the reticulate evolution and biogeographic history of New World cypresses, Hesperocyparis (Cupressaceae).
Algae NIES-2499 , NIES-2863 Genome-Wide Comparative and Phylogenetic Analysis of Putative Algal Carbohydrate Sulfotransferases.
Algae NIES-102 , NIES-843 Horizontal Gene Transfer and Recombination in Cyanobacteriota.
General Microbes JCM31474 An archaeal genetic code with all TAG codons as pyrrolysine.
General Microbes JCM11811 Characterization of two novel species of the genus Flagellimonas reveals the key role of vertical inheritance in the evolution of alginate utilization loci.
General Microbes JCM18555 , JCM18551 , JCM18554 Genomic-based taxonomic classification of the order Sphingomonadales.
GBIF Plant specimens of Ishikawa Museum of Natural History , Database of Aquatic Macrophytes in Japanese lakes , Plant Specimens of The Cattle Museum , Plant specimens of Toyota City Nature Sanctuary , Plant specimens of Tochigi Prefectural Museum , Plant specimens of Nasunogahara Museum , Herbarium Specimens of The Kagoshima University Museum (KAG) , Biodiversity monitoring in Nakaikemi-shicchi , Vascular plant specimens of the herbarium of the Tohoku University (TUS) , Spermatophyta Specimens of Kawasaki Municipal Science Museum , ... RIFinder reveals widespread adaptive remote introgression in grass genomes.
Paramecium GN5-3 (PK000001A) , PD1 (PD000001A) , Rw-1 (PN000001A) , OM4 (PP004001A) , GNS4 (PW000001A) Whole-genome duplications revealed by macronuclear genomes of five rare species of the model ciliates Paramecium.
C.elegans tmC9 An ancient and essential miRNA family controls cellular interaction pathways in C. elegans.
Silkworms p50 Acquisition and repeated alteration of (TTGGG)n telomeric repeats in Odonata (dragonflies and damselflies).
Clawed frogs / Newts Pleurodeles waltl Introns as Protective Buffers Against Transposable Elements Invasion During Genome Gigantism in a Newt.
Medaka Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish.
Medaka An Inversion Polymorphism Under Balancing Selection, Involving Giant Mobile Elements, in an Invasive Fungal Pathogen.
Drosophila Artificial competition shows the replicative superiority of KP elements over complete P elements in Drosophila melanogaster and D. simulans.
Arabidopsis / Cultured plant cells, genes pda08468 The Arabidopsis thaliana putative sialyltransferase resides in the Golgi apparatus but lacks the ability to transfer sialic acid.
Algae NIES-4477 , NIES-4478 Transient molecular chimerism for exploiting xenogeneic organelles.
Drosophila k-s02 A rare, evolutionarily conserved venom protein benefits endoparasitism across parasitoids.
Human and Animal Cells 293T(RCB2202) Birth of protein-coding exons by ancient domestication of LINE-1 retrotransposon.