RRC ID 11897
Author Schorderet P, Duboule D.
Title Structural and functional differences in the long non-coding RNA hotair in mouse and human.
Journal PLoS Genet.
Abstract Long non-coding RNAs regulate various biological processes such as dosage compensation, imprinting, and chromatin organization. HOTAIR, a paradigm of this new class of RNAs, is localized within the human HOXC gene cluster and was shown, in human cells, to regulate HOXD genes in trans via the recruitment of Polycomb Repressive Complex 2 (PRC2), followed by the trimethylation of lysine 27 of histone H3. We looked for the presence of Hotair in mice to assess whether this in trans mechanism was conserved, in particular at the developmental stages, when Hoxd genes must be tightly regulated. We show that the cognate mouse Hotair is poorly conserved in sequence; and its absence, along with the deletion of the HoxC cluster, has surprisingly little effect in vivo, neither on the expression pattern or transcription efficiency, nor on the amount of K27me3 coverage of different Hoxd target genes. We conclude that Hotair may have rapidly evolved within mammals and acquired a functional importance in humans that is not easily revealed in mice. Alternatively, redundant or compensatory mechanisms may mask its function when studied under physiological conditions.
Volume 7(5)
Pages e1002071
Published 2011-5
DOI 10.1371/journal.pgen.1002071
PII PGENETICS-D-11-00310
PMID 21637793
PMC PMC3102750
MeSH Animals Cells, Cultured Conserved Sequence Exons Gene Expression Profiling* Gene Expression Regulation Gene Expression Regulation, Developmental Gene Silencing Genotype Homeodomain Proteins / genetics Homeodomain Proteins / metabolism* Humans Methylation Mice Multigene Family Polycomb-Group Proteins RNA, Long Noncoding / genetics* RNA, Long Noncoding / metabolism RNA, Untranslated / genetics* RNA, Untranslated / metabolism Repressor Proteins / genetics Repressor Proteins / metabolism Sequence Alignment Transcriptional Activation
IF 5.54
Times Cited 124
WOS Category GENETICS & HEREDITY
Resource
Mice Hox C クラスターノックアウトマウス