RRC ID 27525
著者 Park SJ, Choi JH, Cha CJ.
タイトル Chryseobacterium rigui sp. nov., isolated from an estuarine wetland.
ジャーナル Int J Syst Evol Microbiol
Abstract A bacterium, designated strain CJ16(T), was isolated from the estuarine wetland of the Han River. Cells of the isolate were yellow-pigmented, Gram-stain-negative, non-motile and rod-shaped. Growth of strain CJ16(T) was observed in TSB at 5-37 °C (optimum 30 °C), at pH 5.0-9.0 (optimum pH 6.0) and with 0-3 % (w/v) NaCl (optimum 0 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CJ16(T) was most closely related to Chryseobacterium hagamense KCTC 22545(T) (97.2 % 16S rRNA gene sequence similarity). Genomic relatedness based on DNA-DNA hybridization between strain CJ16(T) and C. hagamense KCTC 22545(T) was 23 % (strain CJ16(T) as probe) and 19 % (strain KCTC 22545(T) as probe). Chemotaxonomic analysis revealed that strain CJ16(T) possessed MK-6 as the major isoprenoid quinone and sym-homospermidine as the predominant polyamine. The predominant fatty acids were iso-C15 : 0 (26.9 %), iso-C17 : 0 3-OH (16.8 %) and summed feature 9 (comprising C16 : 0 10-methyl and/or iso-C17 : 1ω9c; 10.5 %). The DNA G+C content of strain CJ16(T) was 37.9 mol%. Based on phenotypic, genotypic and phylogenetic studies, strain CJ16(T) represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium rigui sp. nov. is proposed. The type strain is CJ16(T) ( = KACC 16560(T)  = JCM 18078(T)).
巻・号 63(Pt 3)
ページ 1062-1067
公開日 2013-3-1
DOI 10.1099/ijs.0.040519-0
PMID 22707535
MeSH Bacterial Typing Techniques Base Composition Chryseobacterium / classification* Chryseobacterium / genetics Chryseobacterium / isolation & purification DNA, Bacterial / genetics Estuaries Fatty Acids / analysis Molecular Sequence Data Nucleic Acid Hybridization Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Rivers / microbiology Sequence Analysis, DNA Spermidine / analogs & derivatives Spermidine / analysis Vitamin K 2 / analogs & derivatives Vitamin K 2 / analysis Wetlands*
IF 2.415
引用数 6
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 18078