論文 - 詳細
| RRC ID | 27525 |
|---|---|
| 著者 | Park SJ, Choi JH, Cha CJ. |
| タイトル | Chryseobacterium rigui sp. nov., isolated from an estuarine wetland. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A bacterium, designated strain CJ16(T), was isolated from the estuarine wetland of the Han River. Cells of the isolate were yellow-pigmented, Gram-stain-negative, non-motile and rod-shaped. Growth of strain CJ16(T) was observed in TSB at 5-37 °C (optimum 30 °C), at pH 5.0-9.0 (optimum pH 6.0) and with 0-3 % (w/v) NaCl (optimum 0 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CJ16(T) was most closely related to Chryseobacterium hagamense KCTC 22545(T) (97.2 % 16S rRNA gene sequence similarity). Genomic relatedness based on DNA-DNA hybridization between strain CJ16(T) and C. hagamense KCTC 22545(T) was 23 % (strain CJ16(T) as probe) and 19 % (strain KCTC 22545(T) as probe). Chemotaxonomic analysis revealed that strain CJ16(T) possessed MK-6 as the major isoprenoid quinone and sym-homospermidine as the predominant polyamine. The predominant fatty acids were iso-C15 : 0 (26.9 %), iso-C17 : 0 3-OH (16.8 %) and summed feature 9 (comprising C16 : 0 10-methyl and/or iso-C17 : 1ω9c; 10.5 %). The DNA G+C content of strain CJ16(T) was 37.9 mol%. Based on phenotypic, genotypic and phylogenetic studies, strain CJ16(T) represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium rigui sp. nov. is proposed. The type strain is CJ16(T) ( = KACC 16560(T) = JCM 18078(T)). |
| 巻・号 | 63(Pt 3) |
| ページ | 1062-1067 |
| 公開日 | 2013-3-1 |
| DOI | 10.1099/ijs.0.040519-0 |
| PMID | 22707535 |
| MeSH | Bacterial Typing Techniques Base Composition Chryseobacterium / classification* Chryseobacterium / genetics Chryseobacterium / isolation & purification DNA, Bacterial / genetics Estuaries Fatty Acids / analysis Molecular Sequence Data Nucleic Acid Hybridization Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Rivers / microbiology Sequence Analysis, DNA Spermidine / analogs & derivatives Spermidine / analysis Vitamin K 2 / analogs & derivatives Vitamin K 2 / analysis Wetlands* |
| IF | 2.415 |
| 引用数 | 6 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 18078 |