RRC ID 29341
著者 Xiong ZJ, Zhang JL, Zhang DF, Zhou ZL, Liu MJ, Zhu WY, Zhao LX, Xu LH, Li WJ.
タイトル Rothia endophytica sp. nov., an actinobacterium isolated from Dysophylla stellata (Lour.) Benth.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel endophytic actinobacterium, designated strain YIM 67072(T), was isolated from healthy roots of Dysophylla stellata (Lour.) Benth. Cells of this aerobic, cream-yellow-coloured strain occurred singly, in pairs or in tetrads, were Gram-stain-positive and ovoid- to spherical-shaped. Strain YIM 67072(T) grew at 4-45 °C, pH 5.0-10.0 and in the presence of 0-7 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YIM 67072(T) belonged to the genus Rothia. The isolate contained MK-7 as the major component of the quinone system. The peptidoglycan type was A3α. The polar lipid profile consisted predominantly of diphosphatidylglycerol and glycolipids. The major fatty acids were anteiso-C15 : 0, iso-C15 : 0, anteiso-C17 : 0 and iso-C16 : 0. The DNA G+C content was 53.2 mol%. However, strain YIM 67072(T) differed from its closest relatives Rothia nasimurium CCUG 35957(T) (98.5 % 16S rRNA gene sequence similarity), Rothia amarae JCM 11375(T) (97.6 %) and Rothia terrae L-143(T) (97.3 %) in many phenotypic characteristics. Moreover, the levels of DNA-DNA relatedness between the novel isolate and the three above-mentioned type strains were 28.7±1.3 %, 36.5±1.2 %, 46.8±1.5 %, respectively. Based on comparative analysis of physiological and chemotaxonomic data, strain YIM 67072(T) represents a novel species of the genus Rothia, for which the name Rothia endophytica sp. nov. is proposed. The type strain is YIM 67072(T) ( = DSM 26247(T) = JCM 18541(T)).
巻・号 63(Pt 11)
ページ 3964-3969
公開日 2013-11-1
DOI 10.1099/ijs.0.052522-0
PMID 23710050
MeSH Bacterial Typing Techniques Base Composition Cardiolipins / chemistry China DNA, Bacterial / genetics Fatty Acids / chemistry Lamiaceae / microbiology* Micrococcaceae / classification* Micrococcaceae / genetics Micrococcaceae / isolation & purification Molecular Sequence Data Phylogeny* Plant Roots / microbiology* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 4
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 11375 JCM 18541