RRC ID 29342
著者 Zhao JK, Li XM, Zhang MJ, Jin JH, Jiang CY, Liu SJ.
タイトル Parapedobacter pyrenivorans sp. nov., isolated from a pyrene-degrading microbial enrichment, and emended description of the genus Parapedobacter.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel pyrene-degrading, Gram-negative bacterium, designated strain P-4(T), was isolated from a polycyclic aromatic hydrocarbon-degrading enrichment of polluted soils from a coking chemical plant. Cells of strain P-4(T) were non-motile rods. Strain P-4(T) grew at 15-45 °C (optimum, 37 °C), pH 6.0-10.0 (optimum, pH 8.5) and 0-4 % (w/v) NaCl. Analysis of the 16S rRNA gene sequence showed that strain P-4(T) was related phylogenetically to members of the genus Parapedobacter, with sequence similarity of 93.7-95.1 %. The cellular fatty acids of strain P-4(T) were iso-C15 : 0, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), iso-C17 : 0 3-OH, summed feature 9 (iso-C17 : 1ω9c and/or 10-methyl C16 : 0), anteiso-C15 : 0, iso-C15 : 0 3-OH, C16 : 0, iso-C15 : 1 G, C16 : 0 3-OH and C17 : 0 2-OH. Cells contained menaquinone 7 as the major quinone. The polyamine of strain P-4(T) was homospermidine, and the main polar lipids were phosphatidylethanolamine and a sphingolipid. The G+C content of the DNA was 45.4 mol%. Strain P-4(T) showed a range of phenotypic characteristics that differentiated it from previously recognized Parapedobacter species, particularly its ability to use pyrene as a sole carbon source for growth and its alkaline optimal pH for growth (pH 8.5). On the basis of these results, it is concluded that strain P-4(T) represents a novel species of the genus Parapedobacter, for which the name Parapedobacter pyrenivorans (type strain P-4(T) = NBRC 109113(T) = CGMCC 1.12195(T)) is proposed. An emended description of the genus Parapedobacter is also provided.
巻・号 63(Pt 11)
ページ 3994-3999
公開日 2013-11-1
DOI 10.1099/ijs.0.051938-0
PMID 23710053
MeSH Bacterial Typing Techniques Bacteroidetes / classification* Bacteroidetes / genetics Bacteroidetes / isolation & purification Base Composition China Coke DNA, Bacterial / genetics Fatty Acids / chemistry Molecular Sequence Data Phosphatidylethanolamines / chemistry Phylogeny* Polyamines / chemistry Pyrenes / metabolism* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Soil Pollutants / metabolism Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 11
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 15977 JCM 15978