RRC ID 3177
著者 Yaguchi T, Tanaka R, Nishimura K, Udagawa S.
タイトル Molecular phylogenetics of strains morphologically identified as Fonsecaea pedrosoi from clinical specimens.
ジャーナル Mycoses
Abstract A phylogenetic study based on sequence analysis of the ribosomal internal transcribed spacer (ITS) 1, 5.8S and ITS2 region was performed in 33 strains morphologically identified as Fonsecaea pedrosoi from clinical specimens and living environments, preserved at the Research Center for Pathogenic Fungi and Microbial Toxicoses, Chiba University. The strains of Fonsecaea were divided into two major clades: Group A, representing F. pedrosoi sensu de Hoog et al.; and Group B, representing F. monophora. We identified new lineages: Group B was further clustered into three subgroups, B-1, B-2 and B-3, which were phylogenetically distinct from each other. The subgroups B-1, B-2 and B-3 are thought to be mainly predominant in Africa and Central and South America, Japan and China, and Europe and North America, respectively. Thus, polymorphism in Group B is rather considered to be caused by its geographic parameter. We demonstrate for the first time that all clinical isolates from Japan are monophyletic, belonging to a new lineage of F. monophora.
巻・号 50(4)
ページ 255-60
公開日 2007-7-1
DOI 10.1111/j.1439-0507.2007.01383.x
PII MYC1383
PMID 17576315
MeSH Ascomycota / classification* Ascomycota / genetics Ascomycota / isolation & purification* Cluster Analysis DNA, Fungal / chemistry DNA, Fungal / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics DNA, Ribosomal Spacer / chemistry DNA, Ribosomal Spacer / genetics Genotype Geography Japan Molecular Epidemiology Molecular Sequence Data Mycoses / microbiology* Phylogeny* Polymorphism, Genetic RNA, Ribosomal, 5.8S / genetics Sequence Analysis, DNA
IF 3.575
引用数 16
WOS 分野 DERMATOLOGY MYCOLOGY
リソース情報
病原微生物 C. carrionii(IFM 4811) F. monophora(IFM 4856) F. monophora(IFM 4889) F. monophora(IFM 4890) F. monophora(IFM 4891) F. monophora(IFM 4892) F. monophora(IFM 4893) F. monophora(IFM 4894) F. monophora(IFM 4895) F. monophora(IFM 4897) F. monophora(IFM 4898) F. monophora(IFM 4899) F. monophora(IFM 4900) F. monophora(IFM 4901) F. monophora(IFM 4902) F. monophora(IFM 4904) F. monophora(IFM 4905) F. monophora(IFM 4906) F. monophora(IFM 4907) F. monophora(IFM 4908) F. monophora(IFM 4909) F. monophora(IFM 4911) F. monophora(IFM 4913) F. pedrosoi(IFM 4914) F. pedrosoi(IFM 4915) Fonsecaea sp.(IFM 41517) F. monophora(IFM 41705) Fonsecaea sp.(IFM 41867) Fonsecaea sp.(IFM 41868) F. pedrosoi(IFM 41931) F. pedrosoi(IFM 46410) F. pedrosoi(IFM 46418) F. pedrosoi(IFM 46421) F. monophora(IFM 46422) F. pedrosoi(IFM 47061) F. monophora(IFM 47062) F. monophora(IFM 50909) F. monophora(IFM 53926) F. monophora(IFM 54444) F. monophora(IFM 54445) F. monophora(IFM 54446)