RRC ID 34037
著者 Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Huang HI, Young CC.
タイトル Chitinophaga taiwanensis sp. nov., isolated from the rhizosphere of Arabidopsis thaliana.
ジャーナル Int J Syst Evol Microbiol
Abstract An aerobic, Gram-stain-negative, rod-shaped bacterium (strain CC-ALB-1(T)) was isolated from the rhizosphere of Arabidopsis thaliana. Strain CC-ALB-1(T) was able to grow at 20-30 °C, pH 5.0-8.0 and with up to 1.0% (w/v) NaCl. 16S rRNA gene sequence analysis showed that strain CC-ALB-1(T) had the highest sequence similarity to Chitinophaga ginsengisegetis Gsoil 040(T) (96.9%) and Chitinophaga niastensis JS16-4(T) (96.7%); lower levels of similarity (<97.0%) were observed to strains of all other species of the genus Chitinophaga. The fatty acid profile consisted of iso-C(15 : 0), iso-C(17 : 0) 3-OH, C(15 : 1)ω5c, C(16 : 1)ω5c and summed feature 3 (C(16 : 1)ω7c and/or C(16 : 1)ω6c). The polar lipid profile contained phosphatidylethanolamine, two unidentified aminolipids and five unidentified lipids. The predominant quinone system was menaquinone 7 (MK-7). The DNA G+C content was 53.4 ± 0.4 mol%. Based on its phylogenetic, phenotypic and chemotaxonomic features, strain CC-ALB-1(T) is proposed to represent a novel species within the genus Chitinophaga, for which the name Chitinophaga taiwanensis sp. nov. is proposed. The type strain is CC-ALB-1(T) ( = BCRC 80570(T) = JCM 18895(T)).
巻・号 64(Pt 2)
ページ 426-430
公開日 2014-2-1
DOI 10.1099/ijs.0.054452-0
PMID 24096351
MeSH Arabidopsis / microbiology* Bacterial Typing Techniques Bacteroidetes / classification* Bacteroidetes / genetics Bacteroidetes / isolation & purification Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Molecular Sequence Data Phosphatidylethanolamines / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhizosphere* Sequence Analysis, DNA Spermidine / analogs & derivatives Spermidine / chemistry Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 6
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 15441 JCM 18895