RRC ID 34163
著者 Hyun DW, Shin NR, Kim MS, Kim PS, Jung MJ, Kim JY, Whon TW, Bae JW.
タイトル Polaribacter atrinae sp. nov., isolated from the intestine of a comb pen shell, Atrina pectinata.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel Gram-staining-negative, aerobic, non-motile, yellow-to-orange carotenoid-type-pigmented and rod-shaped bacterium, designated strain WP25T, was isolated from the intestine of a comb pen shell, Atrina pectinata, which was collected from the South Sea near Yeosu in Korea. The isolate grew optimally at 20 °C, at pH 7 and with 2% (w/v) NaCl. 16S rRNA gene sequence analysis showed that strain WP25T belonged to the genus Polaribacter in the family Flavobacteriaceae and the highest sequence similarity was shared with the type strain of Polaribacter sejongensis (98.5%). The major cellular fatty acids were iso-C15:0, anteiso-C15:0, C15:1ω6c and iso-C15:0 3-OH. The main respiratory quinone was menaquinone MK-6. The polar lipids of strain WP25T were phosphatidylethanolamine, two unidentified aminolipids, an unidentified phospholipid and four unidentified lipids. The genomic DNA G+C content was 31.2 mol%. DNA-DNA hybridization experiments indicated <12.6% genomic relatedness with closely related strains. Based on phylogenetic, phenotypic and genotypic analyses, strain WP25T represents a novel species in the genus Polaribacter, for which the name Polaribacter atrinae sp. nov. is proposed, with the type strain WP25T (=KACC 17473T=JCM 19202T).
巻・号 64(Pt 5)
ページ 1654-1661
公開日 2014-5-1
DOI 10.1099/ijs.0.060889-0
PMID 24510977
MeSH Animals Bacterial Typing Techniques Base Composition Bivalvia / microbiology* DNA, Bacterial / genetics Fatty Acids / chemistry Flavobacteriaceae / classification* Flavobacteriaceae / genetics Flavobacteriaceae / isolation & purification Intestines / microbiology* Molecular Sequence Data Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 17
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 19202