RRC ID 34234
Author Zhang Z, Fan X, Gao X, Zhang XH.
Title Achromobacter sediminum sp. nov., isolated from deep subseafloor sediment of South Pacific Gyre.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, facultatively anaerobic, rod-shaped, motile bacterium with a subpolar or lateral flagellum, designated strain XH089(T), was isolated from deep-sea sediment sample collected from the South Pacific Gyre (41°51' S 153°06' W) during the Integrated Ocean Drilling Program (IODP) Expedition 329. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain XH089(T) belonged to the genus Achromobacter and showed the highest 16S rRNA gene sequence similarities with Achromobacter ruhlandii ATCC 15749(T) (96.95%), Achromobacter denitrificans DSM 30026(T) (96.70%) and Achromobacter marplatensis B2(T) (96.66%). The DNA G+C content of strain XH089(T) was 66.5 mol%. The major fatty acids were C16: 0 and C17: 0 cyclo. The major polar lipids were phosphatidylethanolamine, phosphatidylmonomethylethanolamine, diphosphatidylglycerol, three unknown phospholipids and four unknown polar lipids. On the basis of data from the polyphasic analysis, strain XH089(T) is considered to represent a novel species of the genus Achromobacter, for which the name Achromobacter sediminum sp. nov. is proposed. The type strain is XH089(T) ( = DSM 27279(T) = JCM 19223(T)).
Volume 64(Pt 7)
Pages 2244-2249
Published 2014-7-1
DOI 10.1099/ijs.0.062265-0
PMID 24711589
MeSH Achromobacter / classification* Achromobacter / genetics Achromobacter / isolation & purification Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Geologic Sediments / microbiology* Molecular Sequence Data Pacific Ocean Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Seawater / microbiology* Sequence Analysis, DNA
IF 2.415
Times Cited 11
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 19223