| RRC ID |
34417
|
| Author |
Peng S, Hong DD, Xin YB, Jun LM, Hong WG.
|
| Title |
Sphingobacterium yanglingense sp. nov., isolated from the nodule surface of soybean.
|
| Journal |
Int J Syst Evol Microbiol
|
| Abstract |
A Gram-staining-negative, non-motile, catalase- and oxidase-positive strain, designated CCNWSP36-1(T), was isolated from the nodule surface of soybean [Glycine max (L.) Merrill] cultivar Zhonghuang 13. The 16S rRNA gene sequence analysis clearly showed that the isolate represented a member of the genus Sphingobacterium. On the basis of pairwise comparisons of 16S rRNA gene sequences, strain CCNWSP36-1(T) showed 96.8% similarity to Sphingobacterium nematocida CCTCC AB 2010390(T) and less than 95.2% similarity to other members of the genus Sphingobacterium. Growth of strain CCNWSP36-1(T) occurred at 10-40 °C and at pH 5.0-9.0. The NaCl range (w/v) for growth was 0-4%. The predominant isoprenoid quinone was MK-7. The polar lipids were phosphatidylethanolamine and several unidentified polar lipids. Sphingolipid was present. The major fatty acids were iso-C(15:0) and summed feature 3 (comprising C(16:1)ω6c and/or C(16:1)ω7c). The G+C content of the genomic DNA was 41.1 mol%. As the physiological and biochemical characteristics of strain CCNWSP36-1(T) and the type strains of its closest phylogenetic neighbours showed clear differences, a novel species, Sphingobacterium yanglingense, is proposed. The type strain is CCNWSP36-1(T) ( =ACCC 19328(T) =JCM 30166(T)).
|
| Volume |
64(Pt 11)
|
| Pages |
3862-3866
|
| Published |
2014-11-1
|
| DOI |
10.1099/ijs.0.068254-0
|
| PMID |
25168614
|
| MeSH |
Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial / genetics
Fatty Acids / chemistry
Molecular Sequence Data
Phosphatidylethanolamines / chemistry
Phylogeny*
RNA, Ribosomal, 16S / genetics
Root Nodules, Plant / microbiology*
Sequence Analysis, DNA
Soybeans / microbiology*
Sphingobacterium / classification*
Sphingobacterium / genetics
Sphingobacterium / isolation & purification
Vitamin K 2 / chemistry
|
| IF |
2.415
|
| Times Cited |
15
|
|
WOS Category
|
MICROBIOLOGY
|
| Resource |
| General Microbes |
JCM 30166 |
