RRC ID 34460
著者 Ahmed I, Abbas S, Kudo T, Iqbal M, Fujiwara T, Ohkuma M.
タイトル Deinococcus citri sp. nov., isolated from citrus leaf canker lesions.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-stain-positive, strictly aerobic, non-motile, coccoid bacterium, designated NCCP-154(T), was isolated from citrus leaf canker lesions and was subjected to a polyphasic taxonomic study. Strain NCCP-154(T) grew at 10-37 °C (optimum 30 °C) and at pH 7.0-8.0 (optimum pH 7.0). The novel strain exhibited tolerance of UV irradiation (>1000 J m(-2)). Based on 16S rRNA gene sequence analysis, strain NCCP-154(T) showed the highest similarity to Deinococcus gobiensis CGMCC 1.7299(T) (98.8 %), and less than 94 % similarity to other closely related taxa. The chemotaxonomic data [major menaquinone, MK-8; cell-wall peptidoglycan type, A3β (Orn-Gly2); major fatty acids, summed feature 3 (C16 : 1ω7c/iso-C15 : 0 2-OH; 35.3 %) followed by C16 : 0 (12.7 %), iso-C17 : 1ω9c (9.2 %), C17 : 1ω8c (7.4 %) and iso-C17 : 0 (6.9 %); major polar lipids made up of several unidentified phosphoglycolipids and glycolipids and an aminophospholipid, and mannose as the predominant whole-cell sugar] also supported the affiliation of strain NCCP-154(T) to the genus Deinococcus. The level of DNA-DNA relatedness between strain NCCP-154(T) and D. gobiensis JCM 16679(T) was 63.3±3.7 %. The DNA G+C content of strain NCCP-154(T) was 70.0 mol%. Based on the phylogenetic analyses, DNA-DNA hybridization and physiological and biochemical characteristics, strain NCCP-154(T) can be differentiated from species with validly published names. Therefore, it represents a novel species of the genus Deinococcus. The name Deinococcus citri sp. nov. is proposed, with the type strain NCCP-154(T) ( = JCM 19024(T) = DSM 24791(T) = KCTC 13793(T)).
巻・号 64(Pt 12)
ページ 4134-4140
公開日 2014-12-1
DOI 10.1099/ijs.0.066555-0
PMID 25256704
MeSH Bacterial Typing Techniques Base Composition Citrus / microbiology* DNA, Bacterial / genetics Deinococcus / classification* Deinococcus / genetics Deinococcus / isolation & purification Fatty Acids / chemistry Molecular Sequence Data Nucleic Acid Hybridization Pakistan Peptidoglycan / chemistry Phospholipids / chemistry Phylogeny* Plant Diseases / microbiology* Plant Leaves / microbiology Sequence Analysis, DNA Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 7
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 16679 JCM 16871 JCM 19024