RRC ID 40713
著者 Hyun DW, Kim JY, Kim MS, Shin NR, Kim HS, Lee JY, Bae JW.
タイトル Actibacter haliotis sp. nov., isolated from the gut of an abalone, Haliotis discus hannai, and emended description of the genus Actibacter.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel strain, designated strain W113(T), was isolated from the gut of an abalone, Haliotis discus hannai, which was collected from the northern coast of Jeju in Korea. The isolate was a Gram-staining-negative, facultatively anaerobic, non-motile, rod-shaped bacterium producing yellow-to-orange carotenoid-type pigments. 16S rRNA gene sequence analysis showed that the isolate belonged to the genus Actibacter in the family Flavobacteriaceae and it shared the highest sequence similarity with the type strain of Actibacter sediminis (98.8 % similarity). Optimal growth occurred at 25 °C, at pH 7 and with 2 % (w/v) NaCl. The major cellular fatty acids were iso-C15:0, anteiso-C15:0 and iso-C15:1 G. Menaquinone-6 was the main respiratory quinone. The polar lipids of the isolate were phosphatidylethanolamine, three unidentified amino lipids, and three unidentified lipids. The genomic DNA G+C content was 42.6 mol% and DNA-DNA hybridization values indicated that the strain shared <18 % genomic relatedness with the most closely related species. The results of the phylogenetic, phenotypic and genotypic analyses indicated that strain W113(T) represents a novel species in the genus Actibacter, for which the name Actibacter haliotis sp. nov. is proposed. The type strain is W113(T) ( = KACC 17209(T) = JCM 18868(T)).
巻・号 65(Pt 1)
ページ 49-55
公開日 2015-1-1
DOI 10.1099/ijs.0.067041-0
PMID 25269848
MeSH Animals Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Flavobacteriaceae / classification* Flavobacteriaceae / genetics Flavobacteriaceae / isolation & purification Gastrointestinal Tract / microbiology Gastropoda / microbiology* Molecular Sequence Data Nucleic Acid Hybridization Phosphatidylethanolamines / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 16
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 18868