RRC ID 40766
著者 Kim PS, Shin NR, Hyun DW, Kim JY, Whon TW, Oh SJ, Bae JW.
タイトル Corynebacterium atrinae sp. nov., isolated from the gastrointestinal tract of a pen shell, Atrina pectinata.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel Gram-stain-positive, non-motile, facultatively anaerobic and rod-shaped bacterium, strain PSPT56(T), was isolated from the gastrointestinal tract of a pen shell (Atrina pectinata). Optimal growth of strain PSPT56(T) was ascertained to occur at 30 °C, pH 8.0 and in the presence of 1-2 % (w/v) NaCl. The strain was catalase-positive and oxidase-negative. The major cellular fatty acids were C18 : 1ω9c, C16 : 0, C17 : 1ω8c and C17 : 0. Tuberculostearic acid was not present. The major cell-wall sugars were ribose, galactose, glucose and arabinose. Peptidoglycan amino acids were meso-diaminopimelic acid, alanine and glutamic acid. The predominant isoprenoid quinone was MK-8(H2). Strain PSPT56(T) contained phosphatidylglycerol, diphosphatidylglycerol, an unidentified phospholipid, two unidentified lipids and two unidentified amino-lipids. Mycolic acids were detected as constitutive components of the cell wall. A phylogenetic analysis based on 16S rRNA gene sequence similarity showed that strain PSPT56(T) was most closely related to Corynebacterium testudinoris M935/96/4(T) and Corynebacterium felinum M714/95/5(T) with 98.69 % and 97.01 % similarity, respectively. DNA-DNA hybridization experiments indicated less than 29.9 % relatedness to the phylogenetically closest species. The G+C content of genomic DNA was 67.6 mol%. The phenotypic, phylogenetic and genotypic analyses indicated that strain PSPT56(T) represents a novel species within the genus Corynebacterium, for which the name Corynebacterium atrinae is proposed. The type strain is PSPT56(T) ( = KACC 17525(T) = JCM 19266(T)).
巻・号 65(Pt 2)
ページ 531-536
公開日 2015-2-1
DOI 10.1099/ijs.0.067587-0
PMID 25404484
MeSH Animals Bacterial Typing Techniques Base Composition Bivalvia / microbiology* Corynebacterium / classification* Corynebacterium / genetics Corynebacterium / isolation & purification DNA, Bacterial / genetics Diaminopimelic Acid / chemistry Fatty Acids / chemistry Gastrointestinal Tract / microbiology* Molecular Sequence Data Nucleic Acid Hybridization / genetics Peptidoglycan / chemistry Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 4
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 19266