RRC ID 48123
著者 Shin Y, Kang SS, Paek J, Jin TE, Song HS, Kim H, Park HM, Chang YH.
タイトル Clostridium kogasensis sp. nov., a novel member of the genus Clostridium, isolated from soil under a corroded gas pipeline.
ジャーナル Anaerobe
Abstract Two bacterial strains, YHK0403(T) and YHK0508, isolated from soil under a corroded gas pipe line, were revealed as Gram-negative, obligately anaerobic, spore-forming and mesophilic bacteria. The cells were rod-shaped and motile by means of peritrichous flagella. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolates were members of the genus Clostridium and were the most closely related to Clostridium scatologenes KCTC 5588(T) (95.8% sequence similarity), followed by Clostridium magnum KCTC 15177(T) (95.8%), Clostridium drakei KCTC 5440(T) (95.7%) and Clostridium tyrobutyricum KCTC 5387(T) (94.9%). The G + C contents of the isolates were 29.6 mol%. Peptidoglycan in the cell wall was of the A1γ type with meso-diaminopimelic acid. The major polar lipid was diphosphatidylglycerol (DPG), and other minor lipids were revealed as phosphatidylglycerol (PG), phosphatidylethanolamine (PE), two unknown glycolipids (GL1 and GL2), an unknown aminoglycolipid (NGL), two unknown aminophospholipids (PN1 and PN2) and four unknown phospholipids (PL1 to PL4). Predominant fatty acids were C16:0 and C16:1cis9 DMA. The major end products from glucose fermentation were identified as butyrate (12.2 mmol) and acetate (9.8 mmol). Collectively, the results from a wide range of phenotypic tests, chemotaxonomic tests, and phylogenetic analysis indicated that the two isolates represent novel species of the genus Clostridium, for which the name Clostridium kogasensis sp. nov. (type strain, YHK0403(T) = KCTC 15258(T) = JCM 18719(T)) is proposed.
巻・号 39
ページ 14-8
公開日 2016-6-1
DOI 10.1016/j.anaerobe.2016.02.006
PII S1075-9964(16)30009-9
PMID 26899448
MeSH Acetic Acid / metabolism Anaerobiosis Base Composition Butyrates / metabolism Cardiolipins / metabolism Cell Wall / chemistry* Cell Wall / metabolism Clostridium / classification Clostridium / drug effects Clostridium / isolation & purification* Clostridium / metabolism Corrosion Diaminopimelic Acid / metabolism Fatty Acids / metabolism Fermentation Flagella / chemistry* Flagella / metabolism Glucose / metabolism Glucose / pharmacology Iron / chemistry Peptidoglycan / metabolism Phosphatidylethanolamines / metabolism Phylogeny* RNA, Ribosomal, 16S / genetics Soil Microbiology* Spores, Bacterial / chemistry* Spores, Bacterial / metabolism
IF 2.709
引用数 3
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 18719