RRC ID 48332
Author Wu YH, Zhou P, Jian SL, Liu ZS, Wang CS, Oren A, Xu XW.
Title Pontibacter amylolyticus sp. nov., isolated from a deep-sea sediment hydrothermal vent field.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, short rod-shaped bacterium, designated 9-2T, was isolated from a sediment sample collected from a hydrothermal vent field on the south-west Indian Ridge. It formed red colonies, produced carotenoid-like pigments and did not produce bacteriochlorophyll a. Strain 9-2T was positive for hydrolysis of DNA, gelatin and starch, but negative for hydrolysis of aesculin and Tween 60. The sole respiratory quinone was menaquinone-7 (MK-7). The main polar lipids consisted of phosphatidylethanolamine, one unidentified phospholipid and two unidentified polar lipids. The principal fatty acids (>5%) were summed feature 4 (iso-C17:1 I and/or anteiso-C17:1 B), iso-C15:0 and iso-C17:0 3-OH. The genomic DNA G+C content was 49.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain 9-2T should be assigned to the genus Pontibacter. Levels of 16S rRNA gene sequence similarity between the new isolate and the type strains of Pontibacter species with validly published names were in the range 94.0-96.5%. On the basis of phenotypic and genotypic data, strain 9-2T represents a novel species of the genus Pontibacter, for which the name Pontibacter amylolyticus sp. nov. is proposed. The type strain is 9-2T (=CGMCC 1.12749T=JCM 19653T=MCCC 1K00278T).
Volume 66(4)
Pages 1760-1767
Published 2016-4-1
DOI 10.1099/ijsem.0.000944
PMID 26827710
MeSH Bacterial Typing Techniques Bacteriochlorophyll A Base Composition Cytophagaceae / classification* Cytophagaceae / genetics Cytophagaceae / isolation & purification DNA, Bacterial / genetics Fatty Acids / chemistry Geologic Sediments / microbiology Hydrothermal Vents / microbiology* Indian Ocean Molecular Sequence Data Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
Times Cited 9
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 19653