RRC ID 48385
Author Farh ME, Kim YJ, Singh P, Hoang VA, Yang DC.
Title Phenylobacterium panacis sp. nov., isolated from the rhizosphere of rusty mountain ginseng.
Journal Int J Syst Evol Microbiol
Abstract A novel, Gram-stain-negative, rod-shaped bacterial strain, designated as DCY109T, was isolated from the rhizosphere of rusty mountain ginseng root located on Hwacheon mountain of Gangwon province, South Korea. 16S rRNA gene sequence analysis revealed that strain DCY109T belonged to the genus Phenylobacterium and was related closely to Phenylobacterium muchangponense KACC 15042T (98.2 % similarity), Phenylobacterium immobile DSM 1986T (96.9 %) and Phenylobacterium koreense KCTC 12206T (96.7 %). The predominant isoprenoid quinone was ubiquinone (Q-10) and the DNA G+C content was 66.9 mol%. The major polar lipids were phosphatidylglycerol, an unidentified glycolipid and an unidentified lipid. The major fatty acids (>10 %) were C16 : 0, summed feature 3 (which comprised C16 : 1ω7c and/or C16 : 1ω6c) and summed feature 8 (which comprised C18 : 1ω7c and/or C18 : 1ω6c). Mean DNA-DNA relatedness between strain DCY109T and its closest relative, P. muchangponense KACC 15042T, was 15.1±3.9 %. Based on the physiological, biochemical, chemotaxonomic and genetic analyses, strain DCY109T is considered to represent a novel species of the genus Phenylobacterium, for which the name Phenylobacterium panacis sp. nov. is proposed. The type strain is DCY109T (=KCTC 42749T=JCM 31045T).
Volume 66(7)
Pages 2691-2696
Published 2016-7-1
DOI 10.1099/ijsem.0.001109
PMID 27117296
MeSH Bacterial Typing Techniques Caulobacteraceae / classification* Caulobacteraceae / genetics Caulobacteraceae / isolation & purification DNA, Bacterial / genetics Fatty Acids / chemistry Glycolipids / chemistry Nucleic Acid Hybridization Panax / microbiology* Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Rhizosphere* Sequence Analysis, DNA Soil Microbiology* Ubiquinone / chemistry
IF 2.415
Times Cited 5
Resource
General Microbes JCM 31045