論文 - 詳細
| RRC ID | 48387 |
|---|---|
| 著者 | Subhash Y, Bang JJ, You TH, Lee SS. |
| タイトル | Description of Comamonas sediminis sp. nov., isolated from lagoon sediments. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
Strain S3T was isolated from lagoon sediments, and appeared as transparent colonies on agar plates, with cells staining Gram-negative. Catalase and oxidase were positive. S3T hydrolyzed starch, casein and tween-20, while urea, chitin, gelatin and tween-80 were not hydrolysed. C18 : 1ω6c/C18 : 1ω7c, C16 : 1ω6c/C16 : 1ω7c,C17 : 0 cyclo and C16 : 0 were the predominant fatty acids with minor amounts of C10 : 0 3-OH, C12 : 0, C14 : 0 and C16 : 0 2-OH. S3T contained diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), and phosphatidylethanolamine (PE) as major polar lipids with minor amounts of unidentified phospholipid (PL) and unidentified lipids (L1-2). Genomic DNA G+C content was 68.3 mol%. 16S rRNA gene sequence comparisons indicated that S3T represents a member of the genus Comamonas in family Comamonadaceae of the class Betaproteobacteria. S3T has a sequence similarity of 98.96 % with Comamonas koreensis YH12T, 97.93 % with Comamonas guangdongensis CY01T and <96.97 % with other members of the genus Comamonas. DNA-DNA hybridization values between S3T and the type strains of the most closely related species were clearly below the 70 % threshold. On the basis of phenotypic, genotypic and phylogenetic analysis, it is proposed that S3T represents a novel species of the genus Comamonas, for which the name Comamonas sediminis sp. nov. is proposed. The type strain is S3T (=KEMB 563-466T =JCM 31169T). |
| 巻・号 | 66(7) |
| ページ | 2735-2739 |
| 公開日 | 2016-7-1 |
| DOI | 10.1099/ijsem.0.001115 |
| PMID | 27117992 |
| MeSH | Bacterial Typing Techniques Base Composition Comamonas / classification* Comamonas / genetics Comamonas / isolation & purification DNA, Bacterial / genetics Fatty Acids / chemistry Geologic Sediments / microbiology* North Carolina Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA |
| IF | 2.415 |
| 引用数 | 4 |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 31169 |