論文 - 詳細
| RRC ID | 48398 |
|---|---|
| 著者 | Phongsopitanun W, Matsumoto A, Inahashi Y, Kudo T, Mori M, Shiomi K, Takahashi Y, Tanasupawat S. |
| タイトル | Actinoplanes lichenis sp. nov., isolated from lichen. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A novel species of the genus Actinoplanes, strain LDG1-22T, for which we propose the name Actinoplanes lichenis sp. nov., was isolated from a lichen sample collected from tree bark in Thailand. The taxonomic position of the species has been described based on a polyphasic approach. Strain LDG1-22T produced irregular sporangia on agar media. It contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The major menaquinone was MK-9(H4); the polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannosides and phosphatidylglycerol. Whole-cell hydrolysates contained ribose, glucose, mannose and small amounts of arabinose and xylose. The major cellular fatty acids were anteiso-C15 : 0 (31.2 %) and iso-C16 : 0 (14.2 %). Mycolic acids were absent. The G+C content was 73.6 %. 16S rRNA gene sequence analysis of strain LDG1-22T showed highest similarity (98.8 %) to Actinoplanes friuliensis DSM 45797T and it clustered with Actinoplanes nipponensis JCM 3264T and Actinoplanes missouriensis JCM 3121T in phylogenetic tree analysis. On the basis of the phenotypic characteristics and DNA-DNA relatedness, strain LDG1-22T could be distinguished from related species of the genus Actinoplanes and so represents a novel species of this genus. The type strain of Actinoplanes lichenis sp. nov. is LDG1-22T ( = JCM 30485T = TISTR 2343T = PCU 344T). |
| 巻・号 | 66(1) |
| ページ | 468-473 |
| 公開日 | 2016-1-1 |
| DOI | 10.1099/ijsem.0.000746 |
| PMID | 26552374 |
| MeSH | Bacterial Typing Techniques Base Composition Cell Wall / chemistry DNA, Bacterial / genetics Diaminopimelic Acid / chemistry Fatty Acids / chemistry Lichens / microbiology* Micromonosporaceae / classification* Micromonosporaceae / genetics Micromonosporaceae / isolation & purification Molecular Sequence Data Nucleic Acid Hybridization Peptidoglycan / chemistry Phospholipids / chemistry Phylogeny* Plant Bark RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Thailand Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry |
| IF | 2.415 |
| 引用数 | 5 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | X(Twitter) |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 3264 JCM 3121 JCM 30485 |