| RRC ID |
48398
|
| 著者 |
Phongsopitanun W, Matsumoto A, Inahashi Y, Kudo T, Mori M, Shiomi K, Takahashi Y, Tanasupawat S.
|
| タイトル |
Actinoplanes lichenis sp. nov., isolated from lichen.
|
| ジャーナル |
Int J Syst Evol Microbiol
|
| Abstract |
A novel species of the genus Actinoplanes, strain LDG1-22T, for which we propose the name Actinoplanes lichenis sp. nov., was isolated from a lichen sample collected from tree bark in Thailand. The taxonomic position of the species has been described based on a polyphasic approach. Strain LDG1-22T produced irregular sporangia on agar media. It contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The major menaquinone was MK-9(H4); the polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannosides and phosphatidylglycerol. Whole-cell hydrolysates contained ribose, glucose, mannose and small amounts of arabinose and xylose. The major cellular fatty acids were anteiso-C15 : 0 (31.2 %) and iso-C16 : 0 (14.2 %). Mycolic acids were absent. The G+C content was 73.6 %. 16S rRNA gene sequence analysis of strain LDG1-22T showed highest similarity (98.8 %) to Actinoplanes friuliensis DSM 45797T and it clustered with Actinoplanes nipponensis JCM 3264T and Actinoplanes missouriensis JCM 3121T in phylogenetic tree analysis. On the basis of the phenotypic characteristics and DNA-DNA relatedness, strain LDG1-22T could be distinguished from related species of the genus Actinoplanes and so represents a novel species of this genus. The type strain of Actinoplanes lichenis sp. nov. is LDG1-22T ( = JCM 30485T = TISTR 2343T = PCU 344T).
|
| 巻・号 |
66(1)
|
| ページ |
468-473
|
| 公開日 |
2016-1-1
|
| DOI |
10.1099/ijsem.0.000746
|
| PMID |
26552374
|
| MeSH |
Bacterial Typing Techniques
Base Composition
Cell Wall / chemistry
DNA, Bacterial / genetics
Diaminopimelic Acid / chemistry
Fatty Acids / chemistry
Lichens / microbiology*
Micromonosporaceae / classification*
Micromonosporaceae / genetics
Micromonosporaceae / isolation & purification
Molecular Sequence Data
Nucleic Acid Hybridization
Peptidoglycan / chemistry
Phospholipids / chemistry
Phylogeny*
Plant Bark
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Thailand
Vitamin K 2 / analogs & derivatives
Vitamin K 2 / chemistry
|
| IF |
2.415
|
| 引用数 |
5
|
|
WOS 分野
|
MICROBIOLOGY
|
| リソース情報 |
| 一般微生物 |
JCM 3264
JCM 3121
JCM 30485 |
