論文 - 詳細
| RRC ID | 48401 |
|---|---|
| 著者 | Zhang J, Kim YJ, Hoang VA, Lan Nguyen N, Wang C, Kang JP, Wang D, Yang DC. |
| タイトル | Duganella ginsengisoli sp. nov., isolated from ginseng soil. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A Gram-stain-negative, rod-shaped bacterium, designated DCY83T, was isolated from soil of a ginseng field in Gwangju Province, Republic of Korea. Cells were motile by means of flagella. Growth occurred at 4-40 °C (optimum 30 °C), at pH 6-8 (optimum pH 7.0) and with ≤ 0.4 % NaCl. Strain DCY83T was able to produce siderophore and was positive for phosphate solubilization. Indole-3-acetic acid production was 12.9 μg ml- 1 after 3 days in culture. 16S rRNA gene sequence analysis showed that strain DCY83T belonged to the genus Duganella and was related most closely to Duganella sacchari Sac-22T (97.4 % similarity), Duganella zoogloeoides IAM 12670T (97.1 %) and Duganella radicis Sac-41T (97.1 %). The major fatty acids were C16 : 0 and summed feature 3 (containing C16 : 1ω7c and/or C16 : 1ω6c). The major polar lipids were phosphatidylglycerol and phosphatidylethanolamine. The only quinone was ubiquinone 8. The genomic DNA G+C content was 55.3 mol%. DNA-DNA relatedness between strain DCY83T and D. sacchari KCTC 22381T, D. zoogloeoides JCM 20729T and D. radicis KCTC 22382T was 27.7, 22.4 and 35.5 %, respectively. On the basis of the phenotypic and genotypic analysis, DCY83T is classified as representing a novel species in the genus Duganella, for which the name Duganella ginsengisoli sp. nov. is proposed. The type strain is DCY83T ( = KCTC 42409T = JCM 30745T). |
| 巻・号 | 66(1) |
| ページ | 56-61 |
| 公開日 | 2016-1-1 |
| DOI | 10.1099/ijsem.0.000669 |
| PMID | 26449233 |
| MeSH | Bacterial Typing Techniques DNA, Bacterial / genetics Fatty Acids / chemistry Molecular Sequence Data Nucleic Acid Hybridization Oxalobacteraceae / classification* Oxalobacteraceae / genetics Oxalobacteraceae / isolation & purification Panax / microbiology* Phosphatidylethanolamines / chemistry Phosphatidylglycerols / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil Microbiology* Ubiquinone / chemistry |
| IF | 2.415 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Patent(IFI CLAIMS) |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 3.0 |
| リソース情報 | |
| 一般微生物 | JCM 30745 JCM 20729 |