RRC ID 48558
Author Fukuda M, Mikoshiba K.
Title Characterization of KIAA1427 protein as an atypical synaptotagmin (Syt XIII).
Journal Biochem J
Abstract Synaptotagmin (Syt) belongs to a family of type-I membrane proteins and is a protein that consists of a short extracellular N-terminus, a single transmembrane domain, two C2 domains and a short C-terminus. Here, we cloned and characterized a mouse orthologue of human KIAA1427 protein as an atypical Syt (named Syt XIII). Subcellular fractionation and antibody-uptake experiments indicate that Syt XIII is indeed a type-I membrane protein, but, unlike other Syt isoforms, lacks an N-terminal extracellular domain. Syt XIII C2 domains show relatively little similarity to Syt I (less than 35% identity at the amino acid level), and lack key amino acids responsible for Ca2+ binding. Because of these substitutions, the Syt XIII C2 domains did not show Ca2+-dependent phospholipid-binding activity, and Syt XIII is thus classified as a Ca2+ -independent isoform. By contrast, the Syt XIII C-terminal domain is highly homologous with other Syt isoforms and can function as a common receptor for neurexin Ialpha in vitro. Since Syt XIII is expressed in various tissues outside the brain, Syt XIII may be involved in constitutive vesicle transport.
Volume 354(Pt 2)
Pages 249-57
Published 2001-3-1
DOI 10.1042/0264-6021:3540249
PMID 11171101
PMC PMC1221650
MeSH Amino Acid Sequence Animals Base Sequence COS Cells Calcium-Binding Proteins* Cloning, Molecular DNA, Complementary / chemistry Electrophoresis, Polyacrylamide Gel Glycoproteins Humans Membrane Glycoproteins / chemistry* Membrane Glycoproteins / genetics Mice Molecular Sequence Data Nerve Tissue Proteins / chemistry* Nerve Tissue Proteins / genetics Nerve Tissue Proteins / metabolism Neuropeptides Phospholipids / metabolism Phylogeny Polymers / metabolism Protein Conformation RNA, Messenger / analysis Receptors, Cell Surface / chemistry* Receptors, Cell Surface / genetics Sequence Alignment Synaptotagmins
IF 4.097
Times Cited 40
WOS Category BIOCHEMISTRY & MOLECULAR BIOLOGY
Resource
DNA material pEF-T7-Syt XIII (Syt13) (RDB14693) pEF-T7-Syt XIV (Syt14) (RDB14694).