RRC ID 49369
著者 Sujarit K, Kudo T, Ohkuma M, Pathom-Aree W, Lumyong S.
タイトル Streptomyces palmae sp. nov., isolated from oil palm (Elaeis guineensis) rhizosphere soil.
ジャーナル Int J Syst Evol Microbiol
Abstract Actinomycete strain CMU-AB204T was isolated from oil palm rhizosphere soil collected in Chiang Mai University (Chiang Mai, Thailand). Based on morphological and chemotaxonomic characteristics, the organism was considered to belong to the genus Streptomyces. Whole cell-wall hydrolysates consisted of ll-diaminopimelic acid, glucose, ribose and galactose. The predominant menaquinones were MK-9(H4), MK-9(H6), MK-9(H2) and MK-8(H4). The fatty acid profile contained iso-C15 : 0, iso-C16 : 0 and anteiso-C15 : 0 as major components. The principal phospholipids detected were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The DNA G+C content of strain CMU-AB204T was 70.9 mol%. Based on 16S rRNA gene sequence similarity, strain CMU-AB204T was closely related to Streptomyces orinoci JCM 4546T (98.7 %), Streptomyces lilacinus NBRC 12884T (98.5 %), Streptomyces abikoensis CGMCC 4.1662T (98.5 %), Streptomyces griseocarneus JCM 4905T (98.4 %) and Streptomyces xinghaiensis JCM 16958T (98.3 %). Phylogenetic trees revealed that the new strain had a distinct taxonomic position from closely related type strains of the genus Streptomyces. Spiny to hairy spores clearly differentiated strain CMU-AB204T from the five most closely related Streptomyces species, which produced smooth spores. On the basis of evidence from this polyphasic study, it is proposed that strain CMU-AB204T represents a novel species of the genus Streptomyces, namely Streptomyces palmae sp. nov. The type strain is CMU-AB204T (=JCM 31289T=TBRC 1999T).
巻・号 66(10)
ページ 3983-3988
公開日 2016-10-1
DOI 10.1099/ijsem.0.001298
PMID 27405543
MeSH Arecaceae / microbiology* Bacterial Typing Techniques Base Composition Cell Wall / chemistry DNA, Bacterial / genetics Diaminopimelic Acid / chemistry Fatty Acids / chemistry Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhizosphere* Sequence Analysis, DNA Soil Microbiology* Streptomyces / classification* Streptomyces / genetics Streptomyces / isolation & purification Thailand Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
IF 2.415
引用数 5
リソース情報
一般微生物 JCM 31289 JCM 16958 JCM 4546 JCM 4095