RRC ID 5010
著者 Alazard D, Badillo C, Fardeau ML, Cayol JL, Thomas P, Roldan T, Tholozan JL, Ollivier B.
タイトル Tindallia texcoconensis sp. nov., a new haloalkaliphilic bacterium isolated from lake Texcoco, Mexico.
ジャーナル Extremophiles
Abstract A new alkaliphilic and moderately halophilic, strictly anaerobic, fermentative bacterium (strain IMP-300(T)) was isolated from a groundwater sample in the zone of the former soda lake Texcoco in Mexico. Strain IMP-300(T) was Gram-positive, non-sporulated, motile and rod-shaped. It grew within a pH range from 7.5 to 10.5, and an optimum at 9.5. The organism was obligately dependent on the presence of sodium salts. Growth showed an optimum at 35 degrees C with absence of growth above 45 degrees C. It fermented peptone and a few amino acids, preferentially arginine and ornithine, with production of acetate, propionate, and ammonium. Its fatty acid pattern was mainly composed of straight chain saturated, unsaturated, and cyclopropane fatty acids. The G + C content of genomic DNA was 40.0 mol%. Analysis of the 16S rRNA gene sequence indicated that the new isolate belongs to the genus Tindallia, in the low G + C Gram-positive phylum. Phylogenetically, strain IMP-300(T) has Tindallia californiensis, as closest relative with a 97.5% similarity level between their 16S rDNA gene sequences, but the DNA-DNA re-association value between the two DNAs was only 42.2%. On the basis of differences in genotypic, phenotypic, and phylogenetic characteristics, strain IMP-300(T) is proposed as a new species of the genus Tindallia, T. texcoconensis sp. nov. (type strain IMP-300(T ) = DSM 18041(T) = JCM 13990(T)).
巻・号 11(1)
ページ 33-9
公開日 2007-1-1
DOI 10.1007/s00792-006-0006-5
PMID 16932842
MeSH Alkalies / metabolism* Base Composition Carbonates / metabolism DNA, Bacterial / analysis Fatty Acids / metabolism Fermentation Fresh Water / chemistry Fresh Water / microbiology* Genotype Gram-Positive Asporogenous Rods / classification* Gram-Positive Asporogenous Rods / genetics Gram-Positive Asporogenous Rods / growth & development Gram-Positive Asporogenous Rods / isolation & purification* Gram-Positive Asporogenous Rods / metabolism Hydrogen-Ion Concentration Mexico Phenotype Phylogeny RNA, Ribosomal, 16S / analysis RNA, Ribosomal, 16S / genetics Ribotyping Sodium Chloride / metabolism Temperature Water Microbiology*
IF 2.462
引用数 17
WOS 分野 MICROBIOLOGY BIOCHEMISTRY & MOLECULAR BIOLOGY
リソース情報
病原微生物
一般微生物 JCM13990