RRC ID 50784
著者 Key TA, Bowman KS, Lee I, Chun J, Albuquerque L, da Costa MS, Rainey FA, Moe WM.
タイトル Dehalogenimonas formicexedens sp. nov., a chlorinated alkane-respiring bacterium isolated from contaminated groundwater.
ジャーナル Int J Syst Evol Microbiol
Abstract A strictly anaerobic, Gram-stain-negative, non-spore-forming bacterium designated NSZ-14T, isolated from contaminated groundwater in Louisiana (USA), was characterized using a polyphasic approach. Strain NSZ-14T reductively dehalogenated a variety of polychlorinated aliphatic alkanes, producing ethene from 1,2-dichloroethane, propene from 1,2-dichloropropane, a mixture of cis- and trans-1,2-dichloroethene from 1,1,2,2-tetrachloroethane, vinyl chloride from 1,1,2-trichloroethane and allyl chloride (3-chloro-1-propene) from 1,2,3-trichloropropane. Formate or hydrogen could both serve as electron donors. Dechlorination occurred between pH 5.5 and 7.5 and over a temperature range of 20-37 °C. Major cellular fatty acids included C18 : 1ω9c, C14 : 0 and C16 : 0. 16S rRNA gene sequence-based phylogenetic analysis indicated that the strain clusters within the class Dehalococcoidia of the phylum Chloroflexi, most closely related to but distinct from type strains of the species Dehalogenimonas alkenigignens (97.63 % similarity) and Dehalogenimonas lykanthroporepellens (95.05 %). A complete genome sequence determined for strain NSZ-14T revealed a DNA G+C content of 53.96 mol%, which was corroborated by HPLC (54.1±0.2 mol% G+C). Genome-wide comparisons based on average nucleotide identity by orthology and estimated DNA-DNA hybridization values combined with phenotypic and chemotaxonomic traits and phylogenetic analysis indicate that strain NSZ-14T represents a novel species within the genus Dehalogenimonas, for which the name Dehalogenimonas formicexedens sp. nov. is proposed. The type strain is NSZ-14T (=HAMBI 3672T=JCM 19277T=VKM B-3058T). An emended description of Dehalogenimonas alkenigignens is also provided.
巻・号 67(5)
ページ 1366-1373
公開日 2017-5-1
DOI 10.1099/ijsem.0.001819
PMID 28126048
MeSH Alkanes Bacterial Typing Techniques Base Composition Chloroflexi / classification* Chloroflexi / genetics Chloroflexi / isolation & purification DNA, Bacterial / genetics Ethane / analogs & derivatives Ethylene Dichlorides Fatty Acids / chemistry Groundwater / microbiology* Halogenation Hydrocarbons, Chlorinated Louisiana Phylogeny* Propane / analogs & derivatives RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Trichloroethanes
IF 2.415
引用数 13
リソース情報
一般微生物 JCM 19277