RRC ID 50993
著者 Lin SY, Hameed A, Hsu YH, Liu YC, Lai WA, Young CC.
タイトル Filimonas aquilariae sp. nov., isolated from agarwood chips.
ジャーナル Int J Syst Evol Microbiol
Abstract A polyphasic approach was used to characterize a Gram-staining negative bacterium (designated strain CC-YHH650T) isolated from agarwood chips. Strain CC-YHH650T was aerobic and rod-shaped, able to grow at 15-37 °C (optimal 30 °С), pH 6.0-8.0 (optimal 7.0) and 0-1 % (w/v) NaCl (optimal 0 %). Phylogenetic analysis based on 16S rRNA genes revealed that strain CC-YHH650T shared highest sequence similarities with Filimonas lacunae (97.5 %), F. zeae (97.4 %), F. endophytica (97.3 %) and F. aurantiibacter (93.0 %), and lower sequence similarity with other genera (less than 93.0 %). The levels of DNA-DNA relatedness between strain CC-YTH209T, F. lacunae, F. endophytica and F. zeae were estimated to be 18.3, 6.1, 24.7 % (the reciprocal values were 9.8, 8.8, 18.3 %). The major fatty acids were iso-C15 : 0, iso-C15 : 1 G, C16 : 0 3-OH, iso-C17 : 0 3-OH and C16 : 1ω7c/C16 : 1ω6c. The polar lipid profile contained phosphatidylethanolamine, an unidentified phospholipid, two unidentified aminophospholipids, three unidentified aminolipids and three unidentified lipids. The DNA G+C content was 46.6 mol% and the predominant quinone was menaquinone-7 (MK-7). The major polyamine was sym-homospermidine. Based on the distinct phylogenetic, phenotypic and chemotaxonomic traits together with results of comparative 16S rRNA gene sequence analysis, strain CC-YHH650T is considered to represent a novel species of the genus Filimonas, for which the name Filimonas aquilariae sp. nov. is proposed. The type strain is CC-YHH650T (=BCRC 80935T=JCM 31197T).
巻・号 67(9)
ページ 3219-3225
公開日 2017-9-1
DOI 10.1099/ijsem.0.002087
PMID 28829030
MeSH Bacterial Typing Techniques Bacteroidetes / classification* Bacteroidetes / genetics Bacteroidetes / isolation & purification Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Spermidine / analogs & derivatives Spermidine / chemistry Taiwan Thymelaeaceae / microbiology* Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry Wood / microbiology*
IF 2.415
引用数 2
リソース情報
一般微生物 JCM 31197 JCM 19844