RRC ID 51059
著者 Lin SY, Hameed A, Wen CZ, Hsu YH, Liu YC, Lai WA, Young CC.
タイトル Hydrogenophaga aquatica sp. nov., isolated from a hot spring.
ジャーナル Int J Syst Evol Microbiol
Abstract A polyphasic approach was used to characterize an aerobic, Gram-negative, rod-shaped bacterium (designated strain CC-KL-3T) isolated from a hot spring. Phylogenetic analyses based on 16S rRNA genes indicated that strain CC-KL-3T showed highest sequence similarity to Hydrogenophaga bisanensis (97.7 %) and Hydrogenophaga atypica (97.6 %) and lower sequence similarity to other species (less than 97.6 %). The levels of DNA-DNA relatedness between strain CC-KL-3T, H. bisanensis and H. atypica were estimated to be 13.0 and 8.7 % (the reciprocal value was 14.7 and 6.3 %). Strain CC-KL-3T was non-motile, without apparent flagella and able to grow between 15-42 °C (optimal 30 °С), pH 6.0-8.0 (optimal 7.0) and 0-2 % (w/v) NaCl (optimal 0 %). The DNA G+C content was 61.4 mol% and the major quinone system was ubiquinone (Q-8). The polyamine profile revealed the predominance of 2-hydroxyputrescine and putrescine and the dominant cellular fatty acids were C16 : 0 (28.9 %), C16 : 1ω7c/C16 : 1ω6c (41.4 %) and C18 : 1ω7c/C18 : 1ω6c (11.9 %). These data corroborated the affiliation of strain CC-KL-3T to the genus Hydrogenophaga. Based on the distinct phylogenetic, phenotypic and chemotaxonomic traits, and the results of comparative 16S rRNA gene sequence analysis, strain CC-KL-3T is considered to represent a novel species of the genus Hydrogenophaga, affiliated to the family Comamonadaceae, for which the name Hydrogenophaga aquatica sp. nov. is proposed. The type strain is CC-KL-3T (=BCRC 80937T=JCM 31216T).
巻・号 67(10)
ページ 3716-3721
公開日 2017-10-1
DOI 10.1099/ijsem.0.002146
PMID 28901905
MeSH Bacterial Typing Techniques Base Composition Comamonadaceae / classification* Comamonadaceae / genetics Comamonadaceae / isolation & purification DNA, Bacterial / genetics Fatty Acids / chemistry Hot Springs / microbiology* Nucleic Acid Hybridization Phylogeny* Putrescine / analogs & derivatives Putrescine / chemistry RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Taiwan Ubiquinone / chemistry
IF 2.415
引用数 4
リソース情報
一般微生物 JCM 31216