論文 - 詳細
| RRC ID | 51161 |
|---|---|
| 著者 | Jin DH, Subhash Y, Lee SS. |
| タイトル | Psedoduganella eburnea sp. nov., isolated from lagoon sediments. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
Strain 10R5-21T was isolated from lagoon sediments. Cells of strain 10R5-21T were Gram-reaction-negative, rod-shaped and motile by means of polar flagella. The strain was obligately aerobic and positive for catalase and oxidase activity. Strain 10R5-21T was able to grow at 10-37 ˚C (optimum 25-30 ˚C), at pH 5.0-9.0 (optimum pH 6.5-7.5) and in the presence of 0-0.5 % (w/v) NaCl (optimum 0 %). C16 : 1ω7c/C16 : 1ω6c, C16 : 0 and C12 : 0 were present as predominant (>5 %) fatty acids. Q-8 was identified as the major respiratory quinone. Diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine were present as major polar lipids with minor amounts of unidentified aminophospholipids and unidentified aminolipids. The genomic G+C content of strain 10R5-21T was 64.1 mol%. 16S rRNA gene sequence analysis indicated that strain 10R5-21T belongs to the genus Pseudoduganella within the family Oxalobacteraceae of the class Betaproteobacteria. Strain 10R5-21T shared 98.8 % 16S rRNA gene sequence similarity with Pseudoduganella violaceinigra YIM 31327T. DNA-DNA hybridization values between strain 10R5-21T and P. violaceinigra KACC 11669T were clearly below the 70 % threshold. Distinct morphological, biochemical, chemotaxonomic and genetic differences from previously described taxa support the classification of strain 10R5-21T as a representative of a novel species in the genus Pseudoduganella, for which the name Pseudoduganella eburnea sp. nov. is proposed. The type strain is 10R5-21T (=KEMB 563-061T=JCM 31587T). |
| 巻・号 | 67(12) |
| ページ | 5268-5272 |
| 公開日 | 2017-12-1 |
| DOI | 10.1099/ijsem.0.002460 |
| PMID | 29087279 |
| MeSH | Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Geologic Sediments / microbiology* North Carolina Nucleic Acid Hybridization Oxalobacteraceae / classification* Oxalobacteraceae / genetics Oxalobacteraceae / isolation & purification Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Ubiquinone / chemistry Water Microbiology* |
| IF | 2.415 |
| 引用数 | 1 |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 1 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 31587 |