RRC ID 5234
Author Imachi H, Sakai S, Hirayama H, Nakagawa S, Nunoura T, Takai K, Horikoshi K.
Title Exilispira thermophila gen. nov., sp. nov., an anaerobic, thermophilic spirochaete isolated from a deep-sea hydrothermal vent chimney.
Journal Int J Syst Evol Microbiol
Abstract A novel thermophilic, anaerobic bacterium, strain RASEN(T), was isolated from a deep-sea hydrothermal vent chimney sample collected in the Iheya North field, Okinawa Trough, Japan, at a water depth of 982 m. The cells were motile, Gram-negative and helical with hooked ends, 0.23-0.28x15-27 microm in size with an approximate wavelength of 1.1-1.5 microm. Growth of the strain was observed at 37-60 degrees C (optimum 50 degrees C), in 2.5-3.5 % (w/v) NaCl (optimum 2.5-3 % NaCl) and at pH 6.0-7.5 (optimum pH 7.0). The strain grew on yeast extract only of the substrates examined in this study. The G+C content of the genomic DNA was 27.1 mol%. Major fatty acids for the strain were C(16 : 0), C(18 : 1)(Delta9) trans, C(18 : 0) and C(18 : 1)(Delta9) cis. Based on comparative 16S rRNA gene sequence analysis, strain RASEN(T) formed a deeply branching lineage within the phylum Spirochaetes and had only low levels of sequence similarity with other species of the phylum (range of similarity 72.1-80.6 %). Hence, we propose the name Exilispira thermophila gen. nov., sp. nov. The type strain of Exilispira thermophila is strain RASEN(T) (=JCM 14728(T) =NBRC 103205(T) =KCTC 5595(T)).
Volume 58(Pt 10)
Pages 2258-65
Published 2008-10-1
DOI 10.1099/ijs.0.65727-0
PII 58/10/2258
PMID 18842837
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Genes, Bacterial Genes, rRNA Japan Molecular Sequence Data Phenotype Phylogeny RNA, Ribosomal, 16S / genetics Seawater / microbiology* Spirochaetales / chemistry Spirochaetales / classification* Spirochaetales / genetics* Spirochaetales / isolation & purification Water Microbiology
IF 2.415
Times Cited 18
WOS Category MICROBIOLOGY
Resource
General Microbes JCM14728