RRC ID 55213
著者 Zhao GY, Shao F, Zhang M, Zhang XJ, Wang JY, Fan SJ, Dai MX.
タイトル Luteimonas rhizosphaerae sp. nov., isolated from the rhizosphere of Triticum aestivum L.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, rod-shaped bacterium, strain 4-12T, was isolated from the rhizosphere of Triticum aestivum L. from the Xiaokai River irrigation area, China. The isolate grew optimally at 30 °C, pH 7.5-8.0 and with 1.0 % (w/v) NaCl. Based on the 16S rRNA gene sequence and phylogenetic analysis, strain 4-12T belonged to the genus Luteimonas with the highest degree of 16S rRNA gene sequence similarity to Luteimonas tolerans UM1T (97.68 %), followed by Luteimonas terrae THG-MD21T (97.67 %), Lysobacter panaciterrae Gsoil 068T (97.21 %) and Luteimonas aestuarii B9T (97.16 %). However, the DNA-DNA relatedness values between strain 4-12T and closely related Luteimonas strains were well below 40 %. The average nucleotide identity and the Genome-to-Genome Distance Calculator also showed low relatedness (below 95 and 70 %, respectively) between strain 4-12T and the type strains in genus Luteimonas. Ubiquinone-8 was the predominant quinone. The major fatty acids were iso-C15 : 0, iso-C11 : 0, iso-C17 : 0 and iso-C17 : 1ω9c. Polar lipids were dominated by diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and unidentified phospholipids. The DNA G+C content was 69.5 %. According to the phenotypic, genetic and chemotaxonomic data, strain 4-12T is considered to represent a novel species in the genus Luteimonas, for which the name >Luteimonas rhizosphaerae sp. nov. is proposed, with strain 4-12T (=CCTCC AB 2016261T=KCTC 52585T) as the type strain.
巻・号 68(4)
ページ 1197-1203
公開日 2018-4-1
DOI 10.1099/ijsem.0.002649
PMID 29473821
MeSH Bacterial Typing Techniques Base Composition China DNA, Bacterial / genetics Fatty Acids / chemistry Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhizosphere* Sequence Analysis, DNA Soil Microbiology* Triticum / microbiology* Ubiquinone / chemistry Xanthomonadaceae / classification* Xanthomonadaceae / genetics Xanthomonadaceae / isolation & purification
IF 2.166
引用数 5
リソース情報
一般微生物 JCM 30122