Reference - Detail
| RRC ID | 55220 |
|---|---|
| Author | Li FN, Tuo L, Lee SM, Jin T, Liao S, Li W, Yan X, Sun CH. |
| Title | Amnibacterium endophyticum sp. nov., an endophytic actinobacterium isolated from Aegiceras corniculatum. |
| Journal | Int J Syst Evol Microbiol |
| Abstract |
A Gram-stain-positive, aerobic, non-motile, non-spore-forming and short-rod-shaped actinobacterium, designated strain 1T4Z-3T, was isolated from a piece of surface-sterilized branch of Aegiceras corniculatum collected from the Cotai Ecological Zones in Macao, China. Comparative 16S rRNA gene sequence analysis showed that strain 1T4Z-3T was clearly affiliated to the genus Amnibacterium and exhibited 97.9 % gene sequence similarity to Amnibacterium kyonggiense JCM 16463T, 97.3 % gene sequence similarity to Amnibacterium soli JCM 19015T and less than 96.4 % gene sequence similarities to other genera of the family Microbacteriaceae. Strain 1T4Z-3T had L-2,4-diaminobutyric acid as the diagnostic cell-wall diamino acid. The major fatty acids (>10 % of total fatty acids) were iso-C16 : 0 (46.6 %) and anteiso-C15 : 0 (27.3 %). The predominant menaquinones of strain 1T4Z-3T were MK-11 (81.4 %) and MK-12 (14.1 %). The polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, six unidentified glycolipids, four unidentified phospholipids and two unidentified lipids. The DNA G+C content of strain 1T4Z-3T was 71.4 mol%. Based on the phylogenetic, phenotypic and chemotaxonomic features, strain 1T4Z-3T is considered to represent a novel species of the genus Amnibacterium, for which the name Amnibacterium endophyticum sp. nov. is proposed. The type strain of Amnibacterium endophyticum is 1T4Z-3T (=KCTC 39983T=CGMCC 1.16066T). |
| Volume | 68(4) |
| Pages | 1327-1332 |
| Published | 2018-4-1 |
| DOI | 10.1099/ijsem.0.002676 |
| PMID | 29498617 |
| MeSH | Actinomycetales / classification* Actinomycetales / genetics Actinomycetales / isolation & purification Aminobutyrates / chemistry Bacterial Typing Techniques Base Composition Cell Wall / chemistry China DNA, Bacterial / genetics Fatty Acids / chemistry Glycolipids / chemistry Phospholipids / chemistry Phylogeny* Primulaceae / microbiology* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Vitamin K 2 / chemistry |
| IF | 2.166 |
| Times Cited | 6 |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Wikipedia |
| Total number of mentions | 1 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM 16463 JCM 19015 |