RRC ID 55408
著者 Teng JLL, Tang Y, Wong SSY, Chiu TH, Zhao Z, Chan E, Ngan AHY, Lau SKP, Woo PCY.
タイトル Tsukamurella ocularis sp. nov. and Tsukamurella hominis sp. nov., isolated from patients with conjunctivitis in Hong Kong.
ジャーナル Int J Syst Evol Microbiol
Abstract Three bacterial strains, HKU63T, HKU64 and HKU65T, were isolated from the conjunctival swabs of three patients with conjunctivitis in Hong Kong. The three strains were aerobic, Gram-stain-positive, catalase-positive, non-sporulating and non-motile bacilli and exhibited unique biochemical profiles distinguishable from closely related Tsukamurella species. 16S rRNA gene sequence analysis revealed that the three strains shared identical sequences with each other, being most closely related to Tsukamurella tyrosinosolvens and Tsukamurella pulmonis, sharing 99.9 % sequence identity. Sequence analysis of three additional housekeeping genes, groEL, secA and rpoB, revealed 100 % nucleotide sequence identity between HKU63T and HKU64, 94.2-97.0 % nucleotide sequence identities between HKU63T/HKU64 and HKU65T and the three strains shared 82.9-98.9 % sequence identities with other currently recognized Tsukamurella species. DNA-DNA hybridization confirmed that they were distinct from other known species of the genus Tsukamurella(23.0±4.2 to 50.7±3.7 % DNA-DNA relatedness), of which HKU63T and HKU64 represented the same species (≥95.2±4.8 % DNA-DNA relatedness) while HKU65T represented another species. Fatty acid, mycolic acid, cell-wall sugar and peptidoglycan analyses showed that they were typical of members of Tsukamurella. The G+C content of strains HKU63T, HKU64 and HKU65T were 71.3±1.9, 71.3±2.0 and 71.2±2.3 mol% (mean±sd; n=3), respectively. A novel species, Tsukamurella ocularis sp. nov. is proposed to accommodate strains HKU63T and HKU64, with HKU63T (=JCM 31969T=DSM 105034T) designated as the type strain whilst another novel species, Tsukamurella hominis sp. nov., is proposed to accommodate the third strain, HKU65T, which is designated as the type strain (=JCM 31971T=DSM 105036T).
巻・号 68(3)
ページ 810-818
公開日 2018-3-1
DOI 10.1099/ijsem.0.002589
PMID 29458478
MeSH Actinomycetales / classification* Actinomycetales / genetics Actinomycetales / isolation & purification Bacterial Typing Techniques Base Composition Conjunctiva / microbiology* Conjunctivitis / microbiology* DNA, Bacterial / genetics Fatty Acids / chemistry Genes, Bacterial Hong Kong Humans Mycolic Acids / chemistry Nucleic Acid Hybridization Peptidoglycan / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA
IF 2.166
引用数 1
リソース情報
一般微生物 JCM 31969 JCM 31970 JCM 31971 JCM 31017 JCM 31018 JCM 30715 JCM 30714 JCM 17688 JCM 15929 JCM 13375 JCM 12608 JCM 15482