RRC ID 55468
著者 Li W, Lee SY, Kang IK, Ten LN, Jung HY.
タイトル Spirosoma pomorum sp. nov., isolated from apple orchard soil.
ジャーナル J Microbiol
Abstract A Gram-negative, motile, rod-shaped, aerobic bacterial strain, designated S7-2-11T, was isolated from apple orchard soil from Gyeongsangnam-do Province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain S7-2-11T belongs to the family Cytophagaceae in phylum Bacteroidetes, and is closely related to Spirosoma luteolum 16F6ET (94.2% identity), Spirosoma knui 15J8-12T (92.7%), and Spirosoma linguale DSM 74T (91.0%). The G + C content of the genomic DNA of strain S7-2-11T was 49.8 mol%. Strain S7-2-11T contained summed feature 3 (C16:1 ω7c/C16:1 ω6c; 35.1%), C16:1 ω5c (22.4%), C15:0 iso (13.9%), and C17:0 iso 3-OH (10.6%) as major cellular fatty acids, and MK-7 as the predominant respiratory quinone. The main polar lipids were phosphatidylethanolamine, an unidentified aminophospholipid, and two unidentified polar lipids. Phenotypic and chemotaxonomic data supported the affiliation of strain S7-2-11T with the genus Spirosoma. The results of physiological and biochemical tests showed the genotypic and phenotypic differentiation of the isolate from recognized Spirosoma species. On the basis of its phenotypic properties, genotypic distinctiveness, and chemotaxonomic features, strain S7-2-11T represents a novel species of the genus Spirosoma, for which the name Spirosoma pomorum sp. nov. is proposed. The type strain is S7-2-11T (= KCTC 52726T = JCM 32130T).
巻・号 56(2)
ページ 90-96
公開日 2018-2-1
DOI 10.1007/s12275-018-7430-y
PII 10.1007/s12275-018-7430-y
PMID 29392558
MeSH Bacterial Typing Techniques Base Composition Base Sequence Cytophagaceae / classification* Cytophagaceae / genetics Cytophagaceae / isolation & purification* Cytophagaceae / physiology DNA, Bacterial / genetics Fatty Acids / analysis Malus / microbiology* Phenotype Phosphatidylethanolamines Phospholipids / analysis Phylogeny* Quinones / analysis RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil Soil Microbiology* Species Specificity
IF 2.319
引用数 2
リソース情報
一般微生物 JCM 32130