RRC ID 60234
著者 Ten LN, Cho H, Cho YJ, Jung HY.
タイトル Deinococcus terrigena sp. nov., a novel member of the family Deinococcaceae.
ジャーナル Antonie Van Leeuwenhoek
Abstract A bacterial strain, S13-1-2-1T, was isolated from a soil sample collected in Gyeongsangnam-do province, South Korea. Cells were observed to be Gram-stain negative, short rod-shaped and colonies to be pale pink in colour. Analysis of 16S rRNA gene sequences identified this strain as a member of the genus Deinococcus in the family Deinococcaceae, with high levels of sequence similarity with Deinococcus ficus CC-FR2-10T (97.9%) and Deinococcus enclensis NIO-1023T (95.4%). Growth of strain S13-1-2-1T was observed at 10-42 °C, pH 6-8, and in the presence of 0-1.0% NaCl. The isolate was found to exhibit resistance to gamma radiation (D10 10.1 KGy) and UV-light (D10 612 J/m2). The major peptidoglycan amino acids were identified as D-glutamic acid, glycine, alanine and L-ornithine. The predominant respiratory quinone of the strain was identified as menaquinone-8, the major fatty acids were found to be C16:1ω7c (31.4%), C16:0 (18.4%), and C17:1ω8c (17.4%) and the major polar lipids were observed to be an unidentified phosphoglycolipid and an unidentified glycolipid. The genomic DNA G + C content of the strain was determined to be 69.2 mol%. DNA-DNA hybridization with D. ficus showed a relatedness value of 31.5 ± 4.2%. The DNA-DNA hybridization result and the differentiating phenotypic properties clearly indicate that strain S13-1-2-1T represents a novel species in the genus Deinococcus, for which the name Deinococcus terrigena sp. nov. is proposed. The type strain is S13-1-2-1T (= KCTC 33939T = JCM 32248T).
巻・号 112(3)
ページ 389-399
公開日 2019-3-1
DOI 10.1007/s10482-018-1167-9
PII 10.1007/s10482-018-1167-9
PMID 30238338
MeSH Base Composition Cell Wall / chemistry Cytosol / chemistry Deinococcus / classification* Deinococcus / genetics Deinococcus / isolation & purification* Deinococcus / physiology Fatty Acids / analysis Gamma Rays Glycolipids / analysis Hydrogen-Ion Concentration Korea Nucleic Acid Hybridization Peptidoglycan / analysis Phospholipids / analysis Phylogeny* Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Homology, Nucleic Acid Sodium Chloride / metabolism Soil Microbiology Temperature Vitamin K 2 / analysis
IF 1.934
引用数 0
リソース情報
一般微生物 JCM32248