論文 - 詳細
| RRC ID | 60303 |
|---|---|
| 著者 | Ghosh A, Bhadury P. |
| タイトル | Vibrio chemaguriensis sp. nov., from Sundarbans, Bay of Bengal. |
| ジャーナル | Curr Microbiol |
| Abstract |
A new species of Vibrio (annotated as SBOTS_Iso1) was isolated in August 2014 from the Stn1 located in Chemaguri creek of Sundarbans mangrove ecoregion and taxonomically characterized using a polyphasic approach. Phenotypic analysis including biochemical tests and growth across a wide range of salinities indicated the typical estuarine characteristics of this new species. The bacterium was Gram negative, rod-shaped, oxidase and catalase negative and grows in the presence of NaCl. FAME analysis indicated 31.7% of the cellular fatty acids to be made up of 16:1 ω7c/16:1 ω6c. Amplification and sequencing of 16S rRNA and multilocus sequence analysis of four loci (2040 bp; rpoA, topA, mreB, pyrH) and additional sequence data of ftsZ, atpD, ompW and rpoB genes showed this isolate to be a member of Harveyi clade of the genus Vibrio. The closest phylogenetic neighbour was Vibrio alginolyticus ATCC 17749T with 96.8% similarity. Whole-genome sequence data indicates the presence of ~ 5 Mbp genome. GGDC, orthoANIu and AAI indicated 45%, 92% and 0.962 identity respectively with genome of Vibrio alginolyticus ATCC 17749T. The isolate SBOTS_Iso1 has been named Vibrio chemaguriensis sp. nov. on the name of the site from where it was first isolated. |
| 巻・号 | 76(10) |
| ページ | 1118-1127 |
| 公開日 | 2019-10-1 |
| DOI | 10.1007/s00284-019-01731-7 |
| PII | 10.1007/s00284-019-01731-7 |
| PMID | 31280333 |
| MeSH | Bays / microbiology* DNA, Bacterial / genetics Fatty Acids / chemistry Genes, Bacterial / genetics Genome, Bacterial / genetics India Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Species Specificity Vibrio / chemistry Vibrio / classification* Vibrio / genetics Vibrio / growth & development |
| IF | 1.595 |
| 引用数 | 0 |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 各媒体での言及数の合計 | 0 |
| リソース情報 | |
| 一般微生物 | JCM33348 |