| RRC ID |
60377
|
| Author |
Tohya M, Watanabe S, Teramoto K, Uechi K, Tada T, Kuwahara-Arai K, Kinjo T, Maeda S, Nakasone I, Zaw NN, Mya S, Zan KN, Tin HH, Fujita J, Kirikae T.
|
| Title |
Pseudomonas asiatica sp. nov., isolated from hospitalized patients in Japan and Myanmar.
|
| Journal |
Int J Syst Evol Microbiol
|
| Abstract |
A novel Gram-negative, aerobic, rod-shaped, non-spore-forming bacterial strain, RYU5T, was isolated from a stool sample of an inpatient at a hospital in Okinawa, Japan. The optimal growth temperature of RYU5T was 30 °C. Phylogenetic analysis based on the sequences of housekeeping genes, including the 16S rRNA, rpoB, rpoD and gyrB genes, showed that RYU5T was a member of the Pseudomonas putida group and was located close to Pseudomonas monteilii and P. putida. Whole-genome comparisons, using average nucleotide identity and digital DNA-DNA hybridization, confirmed that strain RYU5T should be classified as a novel species of Pseudomonas. Phenotypic characterization tests showed that utilization of d-mannose, d-serine, l-arabinose and d-fructose could distinguish this strain from other related species of the genus Pseudomonas. Based on genetic and phenotypic evidence, strain RYU5T should be classified as a novel species, for which the name Pseudomonas asiatica sp. nov. is proposed. The type strain is RYU5T (=DSM 107182T, =JCM 32716T), with a DNA G+C content of 62.25 mol%.
|
| Volume |
69(5)
|
| Pages |
1361-1368
|
| Published |
2019-5-1
|
| DOI |
10.1099/ijsem.0.003316
|
| PMID |
30810522
|
| MeSH |
Bacterial Typing Techniques
Base Composition
DNA, Bacterial / genetics
Fatty Acids / chemistry
Feces / microbiology*
Female
Genes, Bacterial
Humans
Japan
Male
Myanmar
Nucleic Acid Hybridization
Phylogeny*
Pseudomonas / classification*
Pseudomonas / isolation & purification
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
|
| IF |
2.166
|
| Times Cited |
7
|
| Resource |
| General Microbes |
JCM32716 |
