RRC ID 60473
Author Wang XP, Li CM, Yu Y, Li HR, Du ZJ, Mu DS.
Title Deinococcus arcticus sp. nov., isolated from Silene acaulis rhizosphere soil of the Arctic tundra.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, non-motile, aerobic, short rod-shaped bacterium, designated OD32T, was isolated from a soil sample taken from the rhizosphere of Silene acaulis collected from the Arctic tundra. The novel strain, OD32T, was able to grow at 15-37 °C (optimum, 33 °C), pH 6.5-9.5 (pH 7.5-8.0) and 0-0.5 % NaCl (0 %, w/v). A phylogenetic analysis based on 16S rRNA gene sequences revealed that strain OD32T was most closely related to the genus Deinococcus; it shared the highest sequence similarity (95.7 %) with Deinococcus grandis ATCC 43672T. Genomic DNA G+C content of the strain OD32T was 68.2 mol%. The predominant respiratory quinone was menaquinone 8 (MK-8). The major fatty acids were summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), C15 : 1ω6c, C17 : 1ω6c, C17 : 0, C16 : 0 and iso-C17 : 0. Based on phylogenetic inference and genotypic characteristics, strain OD32T represents a novel species of the genus Deinococcus, for which the name Deinococcus arcticus sp. nov. is proposed. The type strain is OD32T (=KCTC 33972T=CICC 24671T).
Volume 69(11)
Pages 3437-3442
Published 2019-11-1
DOI 10.1099/ijsem.0.003636
PMID 31385781
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Deinococcus / classification* Deinococcus / isolation & purification Fatty Acids / chemistry Genotype Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhizosphere* Sequence Analysis, DNA Silene / microbiology* Soil Microbiology* Svalbard Tundra*
IF 2.166
Times Cited 0
Resource
General Microbes JCM19176 JCM6269 JCM16871