| RRC ID |
60492
|
| 著者 |
Oh WT, Jun JW, Giri SS, Yun S, Kim HJ, Kim SG, Kim SW, Kang JW, Han SJ, Kwon J, Kim JH, Smits THM, Park SC.
|
| タイトル |
Pseudomonas tructae sp. nov., novel species isolated from rainbow trout kidney.
|
| ジャーナル |
Int J Syst Evol Microbiol
|
| Abstract |
This study describes the biochemical and phylogenetic characteristics of a Gram-negative strain, SNU WT1T, isolated from rainbow trout kidney. The 16S rRNA gene sequencing indicated that strain SNU WT1T was highly similar to Pseudomonas wadenswilerensis CCOS 864T and closely related to other Pseudomonas putida-related strains. Multilocus sequence analysis of concatenated partial gyrB, rpoB and rpoD sequences revealed that strain SNU WT1T was distinct from P. putida-related strains and formed a separate clade. The average nucleotide identity and Genome-to-Genome Distance Calculator values were 90.19 and 41.7 %with its closest relative P. wadenswilerensis CCOS 864T; however, it was phenotypically distinct from CCOS 864T with respect to arginine dihydrolase, glucose fermentation, aesculin hydrolysis and N-acetyl-glucosamine assimilation. The major polar lipid of the strain was phosphatidylethanolamine and the major quinone was Q-9. The genome of strain SNU WT1T had 5 685 196 bp with a G+C content of 61.83 mol%. We describe a novel species of genus Pseudomonas, for which the name Pseudomonastructae has been proposed, with SNU WT1T (=KCTC 72265=JCM 33436) as the type strain.
|
| 巻・号 |
69(12)
|
| ページ |
3851-3856
|
| 公開日 |
2019-12-1
|
| DOI |
10.1099/ijsem.0.003696
|
| PMID |
31483752
|
| MeSH |
Animals
Bacterial Typing Techniques
Base Composition
DNA, Bacterial / genetics
Fatty Acids / chemistry
Genes, Bacterial
Kidney / microbiology*
Multilocus Sequence Typing
Oncorhynchus mykiss / microbiology*
Phosphatidylethanolamines / chemistry
Phylogeny*
Pseudomonas / classification*
Pseudomonas / isolation & purification
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Ubiquinone / chemistry
|
| IF |
2.166
|
| 引用数 |
2
|
| リソース情報 |
| 一般微生物 |
JCM33436 |
