論文 - 詳細
| RRC ID | 66430 |
|---|---|
| 著者 | Lin D, Huang Y, Chen Y, Zhu S, Yang J, Chen J. |
| タイトル | Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A Gram-stain-negative bacterium, designated IO390501T, was isolated from a sea water sample from the Indian Ocean and taxonomically characterized using a polyphasic approach. The strain is phylogenetically close to 'Devosia lucknowensis' L15 and Devosia chinhatensis IPL18T, with 16S rRNA gene sequence similarity of 97.7 and 97.4 %, respectively. The genome of IO390501T has a DNA G+C content of 61.9 mol% for the 3.9 Mb chromosome. Genome-based phylogenetic trees indicated that IO390501T clusters as an independent lineage with 'D. lucknowensis' L15. Genomic relatedness of in silico DNA-DNA hybridization between IO390501T and phylogenetic neighbours ranged from 18.8 to 21.5 %, below the cutoff of 70 %, and corresponding average nucleotide identity values were between 71.4 and 79.0 %, lower than the 95.0 % threshold. The predominant cellular fatty acids of IO390501T are summed feature 8 (C18 : 1ω7c/C18 : 1ω6c) and C16 : 0. IO390501T contains ubiquinone-10 as the sole respiratory quinone, and phosphatidylglycerol and glycolipids as the major polar lipids. On the basis of the results of phenotypic, chemotaxonomic and genetic analyses, strain IO390501T represents a novel species of the genus Devosia for which the name Devosiaindica sp. nov. is proposed. The type strain is IO390501T. |
| 巻・号 | 70(1) |
| ページ | 340-345 |
| 公開日 | 2020-1-1 |
| DOI | 10.1099/ijsem.0.003759 |
| PMID | 31596199 |
| MeSH | Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Glycolipids / chemistry Hyphomicrobiaceae / classification* Hyphomicrobiaceae / isolation & purification Indian Ocean Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Seawater / microbiology* Sequence Analysis, DNA Ubiquinone / analogs & derivatives Ubiquinone / chemistry Water Microbiology* |
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| 最多言及媒体 | Blogs |
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| リソース情報 | |
| 一般微生物 | JCM32636 |