RRC ID 66431
著者 Li A, Zhang M, Xu S, Chen M, Yao Q, Zhu HH.
タイトル Pseudidiomarina gelatinasegens sp. nov., isolated from surface sediment of the Terra Nova Bay, Antarctica.
ジャーナル Int J Syst Evol Microbiol
Abstract Polyphasic taxonomic analysis was performed to characterize a novel bacterium, which was isolated from surface sediment of the Terra Nova Bay, Antarctica, and designated as R04H25T. The cells of the isolate were Gram-stain-negative, aerobic, non-motile, slightly curved rods. Growth occurred at 4-42 °C, pH 7.0-9.5, and in 1-15 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences indicated that strain R04H25T formed an independent lineage within the genus Pseudidiomarina and its nearest neighbours were Pseudidiomarina donghaiensis 908033T (98.2 %), Pseudidiomarina marina PIM1T (98.1 %), Pseudidiomarina woesei W11T (97.8 %), Pseudidiomarina maritima 908087T (97.1 %) and Pseudidiomarina tainanensis PIN1T (97.0 %). The average nucleotide identities between strain R04H25T and the nearest neighbours were 76.2-77.7 %. The major fatty acids were iso-C17 : 0, summed feature 9, iso-C15 : 0, C16 : 0 and iso-C11 : 0 3-OH. The polar lipids comprised phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified aminophospholipid, three unidentified glycolipids and two unidentified lipids. The predominant respiratory quinone was ubiquinone 8. The genomic DNA G+C content was 48.2 mol%. On the basis of the phylogenetic, physiological and chemotaxonomic results, we propose a novel species named as Pseudidiomarina gelatinasegens sp. nov. in the genus Pseudidiomarina, with the type strain R04H25T (=GDMCC 1.1503T=KCTC 62911T).
巻・号 70(2)
ページ 708-714
公開日 2020-2-1
DOI 10.1099/ijsem.0.003760
PMID 31697639
MeSH Alteromonadaceae / classification* Alteromonadaceae / isolation & purification Antarctic Regions Bacterial Typing Techniques Base Composition Bays DNA, Bacterial / genetics Fatty Acids / chemistry Geologic Sediments / microbiology* Glycolipids / chemistry Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Seawater / microbiology* Sequence Analysis, DNA Ubiquinone / chemistry
リソース情報
一般微生物 JCM15083 JCM19499 JCM15084