RRC ID 66456
Author Zhao J, Tang X, Li K, Guo Y, Feng M, Gao J.
Title Streptomyces paludis sp. nov., isolated from an alpine wetland soil.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-positive actinobacterium, designated strain GSSD-12T, was isolated from an alpine wetland soil. blast search of the full-length 16S rRNA gene sequence of GSSD-12T indicated it represented a member of the genus Streptomyces, and displayed highest similarity with Streptomyces scopuliridis NRRL B-24574T (99.2 %) and less than 98.6 % similarity with other species of the genus Streptomyces with validly published names. Phylogenetic analysis based on 16S rRNA gene sequences indicated that GSSD-12T was closely related to S. scopuliridis NRRL B-24574T, Streptomyces odonnellii NRRL B-24891T and Streptomyces lushanensis NRRL B-24994T. However, the digital DNA-DNA hybridization value, the average nucleotide identity value and the multilocus sequence analysis evolutionary distance between this strain and its closest relatives indicated that it represented a distinct species. Furthermore, GSSD-12T was also distinctly differentiated from them by morphological, physiological and biochemical characteristics. Therefore, strain GSSD-12T(=CICC 11051T=JCM 33019T) represents a novel species of the genus Streptomyces, for which the name Streptomyces paludis sp. nov. is proposed.
Volume 70(2)
Pages 773-778
Published 2020-2-1
DOI 10.1099/ijsem.0.003821
PMID 31674894
MeSH Bacterial Typing Techniques Base Composition China DNA, Bacterial / genetics Fatty Acids / chemistry Multilocus Sequence Typing Nucleic Acid Hybridization Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Streptomyces / classification* Streptomyces / isolation & purification Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry Wetlands*
Resource
General Microbes JCM33019