| RRC ID |
66494
|
| Author |
Guo Q, Zhou Z, Zhang L, Zhang C, Chen M, Wang B, Lin M, Wang W, Zhang W, Li X.
|
| Title |
Skermanella pratensis sp. nov., isolated from meadow soil, and emended description of the genus Skermanella.
|
| Journal |
Int J Syst Evol Microbiol
|
| Abstract |
A novel Gram-stain-negative, light pink-coloured, short rod-shaped, designated strain W17T, was isolated from a meadow soil sample collected from Xinjiang, PR China. The 16S rRNA gene sequence analysis indicated that strain W17T was related most closely to Skermanella rosea M1T (98.72 %) and Skermanella mucosa 8-14-6T (98.44 %). However, strain W17T showed a low level of DNA-DNA relatedness to S. rosea M1T (32.4±2.6 %) and S. mucosa 8-14-6T (33.5±0.1 %). The genome size of the novel strain was 5.87 Mb and the genomic DNA G+C content was 67.27 mol%. The only respiratory quinone of strain W17T was Q-10. Diphosphatidylglycerol, phosphatidylglycerol. phosphatidylethanolamine and phosphatidylcholine were the major polar lipids. The predominant cellular fatty acids were C18 : 1ω6c and/or C18 : 1ω7c (48.53 %), C16 : 0 (20.88 %) and C18 : 0 (14.92 %). The phylogenetic, phenotypic and chemotaxonomic data showed that strain W17T represents a novel species of the genus Skermanella, for which the name Skermanella pratensis sp. nov. is proposed. The type strain is W17T (=GDMCC 1.1392T=KCTC 62434T).
|
| Volume |
70(3)
|
| Pages |
1605-1609
|
| Published |
2020-3-1
|
| DOI |
10.1099/ijsem.0.003944
|
| PMID |
31904322
|
| MeSH |
Bacterial Typing Techniques
Base Composition
China
DNA, Bacterial / genetics
Fatty Acids / chemistry
Grassland
Nucleic Acid Hybridization
Phospholipids / chemistry
Phylogeny*
Pigmentation
RNA, Ribosomal, 16S / genetics
Rhodospirillaceae / classification*
Rhodospirillaceae / isolation & purification
Sequence Analysis, DNA
Soil Microbiology*
|
| Resource |
| General Microbes |
JCM31276
JCM31590 |
