論文 - 詳細
| RRC ID | 66573 |
|---|---|
| 著者 | Lin SY, Chen WM, Huang GH, Hameed A, Chang CT, Tsai CF, Young CC. |
| タイトル | Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A bacterial strain CC-CTC003T was isolated from a synthetic wooden board. Cells of strain CC-CTC003T were Gram-stain-negative, rod-shaped, motile by gliding and formed yellow colonies. Optimal growth occurred at 25 °C, pH 7 and in the presence of 1 % NaCl. The phylogenetic analyses based on 16S rRNA genes revealed that strain CC-CTC003T belonged to the genus Flavobacterium and was most closely related to Flavobacterium cerinum (95.3 % sequence identity), Flavobacterium maris (94.9 % sequence identity), Flavobacterium qiangtangense (94.8 %) and Flavobacterium subsaxonicum (94.7 %) and had less than 94.7 % sequence similarity to other members of the genus. Average nucleotide identity (ANI) values between strain CC-CTC003T and the type strains of other closely related species were 70.1-74.1 %. The digital DNA-DNA hybridization (dDDH) with F. cerinum was 19.4 %. Strain CC-CTC003T contained C15 : 0, iso-C15 : 0, iso-C15 : 0 3-OH, iso-C17 : 0 3-OH, summed feature 3 (C16 : 1 ω6c / C16 : 1 ω7c) and summed feature 9 (C16 : 0 10-methyl / iso-C17 : 1 ω9c) as the predominant fatty acids. The polar lipid profile consisted of phosphatidylethanolamine, four uncharacterized aminophospholipids, two aminolipids and one unidentified glycolipid. The major polyamine was sym-homospermidine and contained MK-6 as major isoprenoid quinone. The DNA G+C content of the genomic DNA was 39.2 mol%. On the basis of the phylogenetic inference and phenotypic data, strain CC-CTC003T should be classified as a novel species, for which the name Flavobacterium supellecticarium sp. nov. is proposed. The type strain is CC-CTC003T (=BCRC 81146T=JCM 32838T). |
| 巻・号 | 70(6) |
| ページ | 3731-3739 |
| 公開日 | 2020-6-1 |
| DOI | 10.1099/ijsem.0.004227 |
| PMID | 32453684 |
| MeSH | Bacterial Typing Techniques Base Composition Construction Materials / microbiology* DNA, Bacterial / genetics Fatty Acids / chemistry Flavobacterium / classification* Flavobacterium / isolation & purification Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* Pigmentation RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Spermidine / analogs & derivatives Spermidine / chemistry Taiwan Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry Wood / microbiology* |
| オルトメトリクス指標 |
オルトメトリクス指標項目
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| 最多言及媒体 | Blogs |
| 各媒体での言及数の合計 | 3 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM32838 JCM19739 |