RRC ID 66581
著者 Zhang XJ, Feng GD, Yao Q, Zhang J, Phuong LTB, Zhu H.
タイトル Chitinophaga tropicalis sp. nov., isolated from forest soil.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel bacterial strain, designated ysch24T, was isolated from a forest soil sample collected from the Cat Tien National Park, southern Vietnam. Cells were Gram-stain-negative, aerobic, gliding, filamentous or rod-shaped. The results of 16S rRNA gene analyses revealed that strain ysch24T belongs to the genus Chitinophaga, and was most closely related to Chitinophaga silvisoli GDMCC 1.1411T (97.4 %), followed by Chitinophaga oryziterrae JCM 16595T (97.3 %) and Chitinophaga sancti NBRC 15057T (96.9 %). The average nucleotide identity and digital DNA-DNA hybridization values between strain ysch24T and closely related type strains were 72.0-74.0 % and 19.1-19.4 %, respectively. Major fatty acids were iso-C15 : 0, C16 : 1ω5c and iso-C17 : 0 3-OH and the predominant respiratory quinone was menaquinone 7. Polar lipids consisted of phosphatidylethanolamine, four unidentified aminophospholipids, two unidentified phospholipids and four unidentified lipids. The genomic DNA G+C content was 45.6 mol%. The study clearly showed that strain ysch24T should represent a novel species of the genus Chitinophaga, for which the name Chitinophaga tropicalis sp. nov. is proposed. The type strain is ysch24T (=GDMCC 1.1355T=KACC 21527T).
巻・号 70(6)
ページ 3859-3864
公開日 2020-6-1
DOI 10.1099/ijsem.0.004248
PMID 32501195
MeSH Bacterial Typing Techniques Bacteroidetes / classification* Bacteroidetes / isolation & purification Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Forests* Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Vietnam Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
リソース情報
一般微生物 JCM16595