RRC ID 66644
著者 Wang R, Ye Y, Huang Y, Nie Y, Han S, Yu X, Wu C, Li Y, Wu M, Zhang L.
タイトル Agromyces kandeliae sp. nov., isolated from rhizosphere soil of Kandelia candel in a mangrove.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel, Gram-stain-positive, aerobic, non-spore-forming, non-motile and irregular rod-shaped bacterium designated Q22T was isolated from the rhizosphere soil of mangrove plant, Kandelia candel collected in Zhangzhou, Fujian province, China. Strain Q22T was able to grow at 10-40 °C (optimum 30 °C), pH 5.5-9.0 (optimum 7.0-8.0) and with 0-5.0% (w/v) NaCl (optimum 1.0 %). The genomic DNA G+C content was 71.9%. The average nucleotide identity, and in silico DNA-DNA hybridization values between strain Q22T and the reference strains were 79.7-88.9% and 22.6-37.4%, respectively. The predominant isoprenoid quinone was MK-12 and the major fatty acids were anteiso-C15:0, iso-C16:0 and anteiso-C17:0. The major polar lipids of strain Q22T were diphosphatidylglycerol, phosphatidylglycerol, one glycolipid and three unidentified lipids. The strain Q22T contained 2,4-diaminobutyric acid, alanine acid, glutamic acid and glycine in the peptidoglycans. The phylogenetic analysis and genotypic features, along with the phenotypic and chemotaxonomic characteristics, indicate that strain Q22T represents a novel species of the genus Agromyces, for which the name Agromyces kandeliae sp. nov. is proposed. The type strain is Q22T (=MCCC 1K03340T= KCTC 39961T).
巻・号 70(11)
ページ 5861-5867
公開日 2020-11-1
DOI 10.1099/ijsem.0.004492
PMID 33044149
MeSH Actinobacteria / classification* Actinobacteria / isolation & purification Bacterial Typing Techniques Base Composition China DNA, Bacterial / genetics Fatty Acids / chemistry Nucleic Acid Hybridization Peptidoglycan / chemistry Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhizophoraceae / microbiology* Rhizosphere* Sequence Analysis, DNA Soil Microbiology* Vitamin K 2 / chemistry
リソース情報
一般微生物 JCM21373