RRC ID 75310
Author Szuróczki S, Abbaszade G, Bóka K, Schumann P, Neumann-Schaal M, Tóth E.
Title Szabonella alba gen. nov., sp. nov., a motile alkaliphilic bacterium of the family Rhodobacteraceae isolated from a soda lake.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, oxidase- and catalase-positive, rod-shaped, creamy white coloured bacterial strain, DMG-N-6T, was isolated from a water sample of Lake Fertő/Neusiedler See (Hungary). Phylogenetic analysis based on 16S rRNA gene sequences revealed that the strain forms a distinct linage within the family Rhodobacteraceae. Its closest relatives are Tabrizicola alkalilacus DJCT (96.76% similarity) and Tabrizicola piscis K13M18T (96.76%), followed by Tabrizicola sediminis DRYC-M-16T (96.69 %), Rhodobacter sediminicola JA983T (96.62 %), Tabrizicola aquatica RCRI19T (96.47 %) and Cereibacter johrii JA192T (96.18 %). The novel bacterial strain favours an alkaline environment (pH 8.0-12.0) and grows optimally at 18-28°C in the presence of 2-4 % (w/v) NaCl. Cells of DMG-N-6T were motile by a single subpolar flagellum. Bacteriochlorophyll a was not detected. The predominant respiratory quinone was ubiquinone Q-10. The major cellular fatty acid was C18:1ω7c. The polar lipid profile comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine, phosphatidylcholine, an unidentified phospholipid and five unidentified lipids. The assembled draft genome of strain DMG-N-6T had 52 contigs with a total length of 4 219 778 bp and a G+C content of 64.3 mol%. Overall genome-related indices (ANI <77.8 %, AAI <69.0 %, dDDH <19.6 %) with respect to close relatives were all significantly below the corresponding threshold to demarcate bacterial genus and species. Strain DMG-N-6T (=DSM 108208T=NCAIM B.02645T) is strongly different from its closest relatives and is suggested as the type strain of a novel species of a new genus in the family Rhodobacteraceae, for which the name Szabonella alba gen. nov., sp. nov. is proposed.
Volume 72(1)
Published 2022-1-1
DOI 10.1099/ijsem.0.005219
PMID 35099369
MeSH Alkalies* Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Hungary Lakes* / microbiology Phospholipids / chemistry Phylogeny* RNA, Ribosomal, 16S / genetics Rhodobacteraceae* / classification Rhodobacteraceae* / isolation & purification Sequence Analysis, DNA Ubiquinone / analogs & derivatives Ubiquinone / chemistry
Resource
General Microbes JCM 17277 JCM 14543 JCM 30764