RRC ID 90085
Author Wu Y, Wang J, Zhang Z, Shang M, Wang S, Li Y, Li G, Lu S, Ji K, Wang X, Zhang X.
Title Triple base editor catalyzes saturation mutation of adenine, cytidine, and guanine.
Journal Nucleic Acids Res
Abstract Current base editors act on a maximum of two base substrates and generate limited base conversions or transversions, hindering their applicability for inducing DNA sequence diversity. Here, we engineered a triple base editor (named ACG-BEs) using a fusion of adenine base editor with high A/C catalytic activity and evolved N-methylpurine DNA glycosylase. ACG-BEs enables efficient, multiplexed saturation mutagenesis across adenine (A), cytosine (C), and guanine (G), achieving conversion efficiencies of up to 80.5% for A-to-G/C/T, 75.8% for C-to-T/G/A, and 63.4% for G-to-C/T/A in HEK293T cells. Leveraging ACG-BEs, we identify novel mutations in the HBG1/2 promoter region that confer efficient activation of γ-globin expression in HUDEP-2 cells-a promising advancement for therapeutic strategies targeting hemoglobinopathies. These findings highlight ACG-BEs as a cutting-edge platform for multiplexed saturation mutagenesis, offering broad applications in genetic screening and therapeutic base mutation introduction through enhanced DNA sequence diversity.
Volume 54(2)
Published 2026-1-14
DOI 10.1093/nar/gkaf1423
PII 8425338
PMID 41533583
PMC PMC12802905
MeSH Adenine* / chemistry Adenine* / metabolism Cytidine* / chemistry Cytidine* / metabolism DNA Glycosylases* / genetics DNA Glycosylases* / metabolism Guanine* / chemistry Guanine* / metabolism HEK293 Cells Humans Mutagenesis* Mutation*
Resource
Human and Animal Cells HUDEP-2(RCB4557)